Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.28■□□□□ 0.84
S1PR3Q99500 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
S1PR3Q99500 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
S1PR3Q99500 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
S1PR3Q99500 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.27■□□□□ 0.84
S1PR3Q99500 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.27■□□□□ 0.84
S1PR3Q99500 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.27■□□□□ 0.84
S1PR3Q99500 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
S1PR3Q99500 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
S1PR3Q99500 AC008813.1-201ENST00000536597 885 ntBASIC20.27■□□□□ 0.84
S1PR3Q99500 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.27■□□□□ 0.84
S1PR3Q99500 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
S1PR3Q99500 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
S1PR3Q99500 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
S1PR3Q99500 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
S1PR3Q99500 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
S1PR3Q99500 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
S1PR3Q99500 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
S1PR3Q99500 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
S1PR3Q99500 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.25■□□□□ 0.83
S1PR3Q99500 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.25■□□□□ 0.83
S1PR3Q99500 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
S1PR3Q99500 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.24■□□□□ 0.83
S1PR3Q99500 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
S1PR3Q99500 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
S1PR3Q99500 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
S1PR3Q99500 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.24■□□□□ 0.83
S1PR3Q99500 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
S1PR3Q99500 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
S1PR3Q99500 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.24■□□□□ 0.83
S1PR3Q99500 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
S1PR3Q99500 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
S1PR3Q99500 WHAMMP3-201ENST00000611636 1609 ntBASIC20.24■□□□□ 0.83
S1PR3Q99500 AL449106.1-201ENST00000608517 1980 ntBASIC20.23■□□□□ 0.83
S1PR3Q99500 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.23■□□□□ 0.83
S1PR3Q99500 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
S1PR3Q99500 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
S1PR3Q99500 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
S1PR3Q99500 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
S1PR3Q99500 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
S1PR3Q99500 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.22■□□□□ 0.83
S1PR3Q99500 MIR3648-2-201ENST00000581792 180 ntBASIC20.22■□□□□ 0.83
S1PR3Q99500 MIR3648-1-201ENST00000615959 180 ntBASIC20.22■□□□□ 0.83
S1PR3Q99500 CR559946.2-201ENST00000623684 991 ntBASIC20.22■□□□□ 0.83
S1PR3Q99500 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.22■□□□□ 0.83
S1PR3Q99500 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
S1PR3Q99500 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
S1PR3Q99500 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
S1PR3Q99500 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
S1PR3Q99500 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
S1PR3Q99500 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
S1PR3Q99500 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
S1PR3Q99500 AP004609.3-201ENST00000610705 1884 ntBASIC20.2■□□□□ 0.82
S1PR3Q99500 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
S1PR3Q99500 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.19■□□□□ 0.82
S1PR3Q99500 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
S1PR3Q99500 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
S1PR3Q99500 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.19■□□□□ 0.82
S1PR3Q99500 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.18■□□□□ 0.82
S1PR3Q99500 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
S1PR3Q99500 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
S1PR3Q99500 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
S1PR3Q99500 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
S1PR3Q99500 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.18■□□□□ 0.82
S1PR3Q99500 AC016575.1-201ENST00000607026 382 ntBASIC20.17■□□□□ 0.82
S1PR3Q99500 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.17■□□□□ 0.82
S1PR3Q99500 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
S1PR3Q99500 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
S1PR3Q99500 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.17■□□□□ 0.82
S1PR3Q99500 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
S1PR3Q99500 AC091060.1-201ENST00000623524 1766 ntBASIC20.16■□□□□ 0.82
S1PR3Q99500 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.15■□□□□ 0.82
S1PR3Q99500 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.15■□□□□ 0.82
S1PR3Q99500 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
S1PR3Q99500 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
S1PR3Q99500 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR3Q99500 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
S1PR3Q99500 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
S1PR3Q99500 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
S1PR3Q99500 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.14■□□□□ 0.81
S1PR3Q99500 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
S1PR3Q99500 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
S1PR3Q99500 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
S1PR3Q99500 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.14■□□□□ 0.81
S1PR3Q99500 AC148477.6-201ENST00000623746 465 ntBASIC20.14■□□□□ 0.81
S1PR3Q99500 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
S1PR3Q99500 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
S1PR3Q99500 AC142472.1-201ENST00000612013 1741 ntBASIC20.13■□□□□ 0.81
S1PR3Q99500 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
S1PR3Q99500 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR3Q99500 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR3Q99500 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR3Q99500 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR3Q99500 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
S1PR3Q99500 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.13■□□□□ 0.81
S1PR3Q99500 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR3Q99500 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
S1PR3Q99500 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
S1PR3Q99500 MIR219A2-201ENST00000608502 1504 ntBASIC20.12■□□□□ 0.81
S1PR3Q99500 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms