Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.92■□□□□ 0.78
RITA1Q96K30 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RITA1Q96K30 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RITA1Q96K30 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RITA1Q96K30 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RITA1Q96K30 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RITA1Q96K30 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.91■□□□□ 0.78
RITA1Q96K30 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RITA1Q96K30 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RITA1Q96K30 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.9■□□□□ 0.78
RITA1Q96K30 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
RITA1Q96K30 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
RITA1Q96K30 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RITA1Q96K30 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RITA1Q96K30 MIR639-201ENST00000384974 98 ntBASIC19.89■□□□□ 0.77
RITA1Q96K30 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RITA1Q96K30 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RITA1Q96K30 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RITA1Q96K30 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RITA1Q96K30 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.89■□□□□ 0.77
RITA1Q96K30 AP004609.3-201ENST00000610705 1884 ntBASIC19.89■□□□□ 0.77
RITA1Q96K30 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.88■□□□□ 0.77
RITA1Q96K30 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RITA1Q96K30 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RITA1Q96K30 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RITA1Q96K30 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RITA1Q96K30 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.88■□□□□ 0.77
RITA1Q96K30 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RITA1Q96K30 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.88■□□□□ 0.77
RITA1Q96K30 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.88■□□□□ 0.77
RITA1Q96K30 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.87■□□□□ 0.77
RITA1Q96K30 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RITA1Q96K30 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RITA1Q96K30 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.87■□□□□ 0.77
RITA1Q96K30 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.87■□□□□ 0.77
RITA1Q96K30 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RITA1Q96K30 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RITA1Q96K30 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RITA1Q96K30 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RITA1Q96K30 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RITA1Q96K30 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RITA1Q96K30 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RITA1Q96K30 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.85■□□□□ 0.77
RITA1Q96K30 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.85■□□□□ 0.77
RITA1Q96K30 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RITA1Q96K30 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.85■□□□□ 0.77
RITA1Q96K30 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RITA1Q96K30 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RITA1Q96K30 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RITA1Q96K30 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RITA1Q96K30 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RITA1Q96K30 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RITA1Q96K30 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RITA1Q96K30 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RITA1Q96K30 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RITA1Q96K30 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RITA1Q96K30 AL359258.2-201ENST00000564063 1566 ntBASIC19.83■□□□□ 0.77
RITA1Q96K30 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RITA1Q96K30 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.83■□□□□ 0.77
RITA1Q96K30 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.83■□□□□ 0.76
RITA1Q96K30 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.82■□□□□ 0.76
RITA1Q96K30 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RITA1Q96K30 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.81■□□□□ 0.76
RITA1Q96K30 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RITA1Q96K30 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RITA1Q96K30 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.8■□□□□ 0.76
RITA1Q96K30 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.8■□□□□ 0.76
RITA1Q96K30 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RITA1Q96K30 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RITA1Q96K30 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RITA1Q96K30 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.8■□□□□ 0.76
RITA1Q96K30 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RITA1Q96K30 AC142472.1-201ENST00000612013 1741 ntBASIC19.79■□□□□ 0.76
RITA1Q96K30 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.79■□□□□ 0.76
RITA1Q96K30 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
RITA1Q96K30 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RITA1Q96K30 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RITA1Q96K30 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RITA1Q96K30 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RITA1Q96K30 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.78■□□□□ 0.76
RITA1Q96K30 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RITA1Q96K30 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.78■□□□□ 0.76
RITA1Q96K30 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RITA1Q96K30 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RITA1Q96K30 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RITA1Q96K30 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RITA1Q96K30 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RITA1Q96K30 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.77■□□□□ 0.75
RITA1Q96K30 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms