Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF170Q96K19 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RNF170Q96K19 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF170Q96K19 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF170Q96K19 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF170Q96K19 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF170Q96K19 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RNF170Q96K19 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF170Q96K19 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF170Q96K19 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF170Q96K19 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF170Q96K19 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF170Q96K19 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF170Q96K19 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.77■■□□□ 1.08
RNF170Q96K19 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF170Q96K19 DUX4L29-201ENST00000425409 679 ntBASIC21.76■■□□□ 1.07
RNF170Q96K19 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF170Q96K19 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF170Q96K19 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF170Q96K19 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF170Q96K19 AC021231.2-201ENST00000594613 730 ntBASIC21.75■■□□□ 1.07
RNF170Q96K19 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF170Q96K19 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF170Q96K19 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF170Q96K19 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF170Q96K19 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF170Q96K19 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF170Q96K19 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF170Q96K19 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF170Q96K19 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF170Q96K19 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF170Q96K19 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF170Q96K19 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RNF170Q96K19 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF170Q96K19 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF170Q96K19 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF170Q96K19 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF170Q96K19 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF170Q96K19 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF170Q96K19 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF170Q96K19 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RNF170Q96K19 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF170Q96K19 AP002414.2-202ENST00000590929 1450 ntBASIC21.71■■□□□ 1.07
RNF170Q96K19 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF170Q96K19 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF170Q96K19 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF170Q96K19 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF170Q96K19 AC133561.1-201ENST00000568600 2415 ntBASIC21.7■■□□□ 1.06
RNF170Q96K19 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
RNF170Q96K19 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RNF170Q96K19 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF170Q96K19 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF170Q96K19 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF170Q96K19 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF170Q96K19 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF170Q96K19 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF170Q96K19 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF170Q96K19 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF170Q96K19 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF170Q96K19 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF170Q96K19 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF170Q96K19 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF170Q96K19 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF170Q96K19 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF170Q96K19 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF170Q96K19 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF170Q96K19 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF170Q96K19 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF170Q96K19 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF170Q96K19 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF170Q96K19 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF170Q96K19 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF170Q96K19 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF170Q96K19 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF170Q96K19 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF170Q96K19 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF170Q96K19 AC145676.1-201ENST00000514988 2004 ntBASIC21.65■■□□□ 1.06
RNF170Q96K19 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
RNF170Q96K19 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF170Q96K19 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF170Q96K19 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF170Q96K19 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF170Q96K19 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF170Q96K19 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF170Q96K19 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF170Q96K19 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF170Q96K19 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
RNF170Q96K19 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF170Q96K19 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
RNF170Q96K19 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF170Q96K19 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RNF170Q96K19 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RNF170Q96K19 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF170Q96K19 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RNF170Q96K19 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RNF170Q96K19 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.62■■□□□ 1.05
RNF170Q96K19 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF170Q96K19 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RNF170Q96K19 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF170Q96K19 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms