Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPS4Y2Q8TD47 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4Y2Q8TD47 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.67■■□□□ 1.06
RPS4Y2Q8TD47 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
RPS4Y2Q8TD47 MIR3665-201ENST00000578708 105 ntBASIC21.66■■□□□ 1.06
RPS4Y2Q8TD47 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4Y2Q8TD47 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.66■■□□□ 1.06
RPS4Y2Q8TD47 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4Y2Q8TD47 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4Y2Q8TD47 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4Y2Q8TD47 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4Y2Q8TD47 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.65■■□□□ 1.06
RPS4Y2Q8TD47 AL162393.1-201ENST00000437852 946 ntBASIC21.65■■□□□ 1.06
RPS4Y2Q8TD47 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4Y2Q8TD47 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.64■■□□□ 1.05
RPS4Y2Q8TD47 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPS4Y2Q8TD47 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.64■■□□□ 1.05
RPS4Y2Q8TD47 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.64■■□□□ 1.05
RPS4Y2Q8TD47 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPS4Y2Q8TD47 WHAMMP3-201ENST00000611636 1609 ntBASIC21.64■■□□□ 1.05
RPS4Y2Q8TD47 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 RPS2P35-201ENST00000443417 897 ntBASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.63■■□□□ 1.05
RPS4Y2Q8TD47 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RPS4Y2Q8TD47 AC110285.7-201ENST00000624417 1536 ntBASIC21.62■■□□□ 1.05
RPS4Y2Q8TD47 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RPS4Y2Q8TD47 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4Y2Q8TD47 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.61■■□□□ 1.05
RPS4Y2Q8TD47 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4Y2Q8TD47 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4Y2Q8TD47 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.61■■□□□ 1.05
RPS4Y2Q8TD47 AC093323.1-202ENST00000635031 2045 ntBASIC21.61■■□□□ 1.05
RPS4Y2Q8TD47 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4Y2Q8TD47 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4Y2Q8TD47 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4Y2Q8TD47 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
RPS4Y2Q8TD47 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
RPS4Y2Q8TD47 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.6■■□□□ 1.05
RPS4Y2Q8TD47 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPS4Y2Q8TD47 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPS4Y2Q8TD47 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RPS4Y2Q8TD47 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
RPS4Y2Q8TD47 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPS4Y2Q8TD47 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPS4Y2Q8TD47 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPS4Y2Q8TD47 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPS4Y2Q8TD47 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RPS4Y2Q8TD47 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPS4Y2Q8TD47 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.58■■□□□ 1.05
RPS4Y2Q8TD47 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.58■■□□□ 1.05
RPS4Y2Q8TD47 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.58■■□□□ 1.05
RPS4Y2Q8TD47 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPS4Y2Q8TD47 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPS4Y2Q8TD47 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPS4Y2Q8TD47 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPS4Y2Q8TD47 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPS4Y2Q8TD47 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPS4Y2Q8TD47 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPS4Y2Q8TD47 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPS4Y2Q8TD47 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPS4Y2Q8TD47 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.55■■□□□ 1.04
RPS4Y2Q8TD47 AC010501.1-201ENST00000606270 1962 ntBASIC21.55■■□□□ 1.04
RPS4Y2Q8TD47 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPS4Y2Q8TD47 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPS4Y2Q8TD47 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPS4Y2Q8TD47 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPS4Y2Q8TD47 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPS4Y2Q8TD47 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPS4Y2Q8TD47 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPS4Y2Q8TD47 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPS4Y2Q8TD47 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPS4Y2Q8TD47 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPS4Y2Q8TD47 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPS4Y2Q8TD47 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.52■■□□□ 1.04
RPS4Y2Q8TD47 ERN1-208ENST00000606895 2068 ntBASIC21.51■■□□□ 1.03
RPS4Y2Q8TD47 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPS4Y2Q8TD47 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.51■■□□□ 1.03
RPS4Y2Q8TD47 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPS4Y2Q8TD47 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPS4Y2Q8TD47 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.51■■□□□ 1.03
RPS4Y2Q8TD47 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPS4Y2Q8TD47 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RPS4Y2Q8TD47 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPS4Y2Q8TD47 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPS4Y2Q8TD47 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPS4Y2Q8TD47 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPS4Y2Q8TD47 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPS4Y2Q8TD47 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.49■■□□□ 1.03
RPS4Y2Q8TD47 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPS4Y2Q8TD47 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.49■■□□□ 1.03
RPS4Y2Q8TD47 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPS4Y2Q8TD47 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPS4Y2Q8TD47 AC087741.3-201ENST00000624270 1347 ntBASIC21.49■■□□□ 1.03
RPS4Y2Q8TD47 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms