Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.62■■□□□ 1.05
CPEB3Q8NE35 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPEB3Q8NE35 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPEB3Q8NE35 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPEB3Q8NE35 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPEB3Q8NE35 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CPEB3Q8NE35 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPEB3Q8NE35 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPEB3Q8NE35 AL359258.2-201ENST00000564063 1566 ntBASIC21.57■■□□□ 1.04
CPEB3Q8NE35 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPEB3Q8NE35 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPEB3Q8NE35 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPEB3Q8NE35 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPEB3Q8NE35 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.56■■□□□ 1.04
CPEB3Q8NE35 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.56■■□□□ 1.04
CPEB3Q8NE35 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.56■■□□□ 1.04
CPEB3Q8NE35 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.55■■□□□ 1.04
CPEB3Q8NE35 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.54■■□□□ 1.04
CPEB3Q8NE35 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.53■■□□□ 1.04
CPEB3Q8NE35 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.53■■□□□ 1.04
CPEB3Q8NE35 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.53■■□□□ 1.04
CPEB3Q8NE35 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPEB3Q8NE35 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CPEB3Q8NE35 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPEB3Q8NE35 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPEB3Q8NE35 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 AP004609.3-201ENST00000610705 1884 ntBASIC21.51■■□□□ 1.03
CPEB3Q8NE35 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPEB3Q8NE35 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 AC126177.7-201ENST00000547904 679 ntBASIC21.5■■□□□ 1.03
CPEB3Q8NE35 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.5■■□□□ 1.03
CPEB3Q8NE35 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CPEB3Q8NE35 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CPEB3Q8NE35 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.48■■□□□ 1.03
CPEB3Q8NE35 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPEB3Q8NE35 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.48■■□□□ 1.03
CPEB3Q8NE35 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPEB3Q8NE35 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 AC060814.1-201ENST00000554326 538 ntBASIC21.47■■□□□ 1.03
CPEB3Q8NE35 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPEB3Q8NE35 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms