Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF439Q8NDP4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZNF439Q8NDP4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZNF439Q8NDP4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF439Q8NDP4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.35■□□□□ 0.85
ZNF439Q8NDP4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF439Q8NDP4 WHAMMP3-201ENST00000611636 1609 ntBASIC20.35■□□□□ 0.85
ZNF439Q8NDP4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.34■□□□□ 0.85
ZNF439Q8NDP4 CR559946.2-201ENST00000623684 991 ntBASIC20.34■□□□□ 0.85
ZNF439Q8NDP4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF439Q8NDP4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF439Q8NDP4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
ZNF439Q8NDP4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF439Q8NDP4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF439Q8NDP4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF439Q8NDP4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ZNF439Q8NDP4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF439Q8NDP4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF439Q8NDP4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ZNF439Q8NDP4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF439Q8NDP4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 AC148477.6-201ENST00000623746 465 ntBASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF439Q8NDP4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF439Q8NDP4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZNF439Q8NDP4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF439Q8NDP4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ZNF439Q8NDP4 HLA-V-202ENST00000446817 847 ntBASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 MIR219A2-201ENST00000608502 1504 ntBASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZNF439Q8NDP4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 MIR3648-2-201ENST00000581792 180 ntBASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 MIR3648-1-201ENST00000615959 180 ntBASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF439Q8NDP4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ZNF439Q8NDP4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNF439Q8NDP4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF439Q8NDP4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF439Q8NDP4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ZNF439Q8NDP4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF439Q8NDP4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ZNF439Q8NDP4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 AP004609.3-201ENST00000610705 1884 ntBASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF439Q8NDP4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZNF439Q8NDP4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF439Q8NDP4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF439Q8NDP4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF439Q8NDP4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF439Q8NDP4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF439Q8NDP4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZNF439Q8NDP4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF439Q8NDP4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 AC142472.1-201ENST00000612013 1741 ntBASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF439Q8NDP4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF439Q8NDP4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF439Q8NDP4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF439Q8NDP4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF439Q8NDP4 AC016575.1-201ENST00000607026 382 ntBASIC20.22■□□□□ 0.83
ZNF439Q8NDP4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF439Q8NDP4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF439Q8NDP4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF439Q8NDP4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF439Q8NDP4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms