Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 AP006261.1-201ENST00000584783 668 ntBASIC21.28■■□□□ 1
NKAIN3Q8N8D7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.28■■□□□ 1
NKAIN3Q8N8D7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NKAIN3Q8N8D7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NKAIN3Q8N8D7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.27■■□□□ 1
NKAIN3Q8N8D7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NKAIN3Q8N8D7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NKAIN3Q8N8D7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NKAIN3Q8N8D7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.26■□□□□ 0.99
NKAIN3Q8N8D7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKAIN3Q8N8D7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NKAIN3Q8N8D7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKAIN3Q8N8D7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKAIN3Q8N8D7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NKAIN3Q8N8D7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NKAIN3Q8N8D7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKAIN3Q8N8D7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKAIN3Q8N8D7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NKAIN3Q8N8D7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NKAIN3Q8N8D7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKAIN3Q8N8D7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKAIN3Q8N8D7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKAIN3Q8N8D7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NKAIN3Q8N8D7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKAIN3Q8N8D7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.24■□□□□ 0.99
NKAIN3Q8N8D7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKAIN3Q8N8D7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NKAIN3Q8N8D7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NKAIN3Q8N8D7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NKAIN3Q8N8D7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NKAIN3Q8N8D7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NKAIN3Q8N8D7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKAIN3Q8N8D7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
NKAIN3Q8N8D7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKAIN3Q8N8D7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.23■□□□□ 0.99
NKAIN3Q8N8D7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NKAIN3Q8N8D7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.23■□□□□ 0.99
NKAIN3Q8N8D7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NKAIN3Q8N8D7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NKAIN3Q8N8D7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NKAIN3Q8N8D7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKAIN3Q8N8D7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKAIN3Q8N8D7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKAIN3Q8N8D7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NKAIN3Q8N8D7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
NKAIN3Q8N8D7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.21■□□□□ 0.99
NKAIN3Q8N8D7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NKAIN3Q8N8D7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.21■□□□□ 0.99
NKAIN3Q8N8D7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKAIN3Q8N8D7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.2■□□□□ 0.98
NKAIN3Q8N8D7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NKAIN3Q8N8D7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.2■□□□□ 0.98
NKAIN3Q8N8D7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NKAIN3Q8N8D7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKAIN3Q8N8D7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
NKAIN3Q8N8D7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
NKAIN3Q8N8D7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NKAIN3Q8N8D7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NKAIN3Q8N8D7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NKAIN3Q8N8D7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NKAIN3Q8N8D7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NKAIN3Q8N8D7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NKAIN3Q8N8D7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NKAIN3Q8N8D7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NKAIN3Q8N8D7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NKAIN3Q8N8D7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NKAIN3Q8N8D7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NKAIN3Q8N8D7 AC087741.3-201ENST00000624270 1347 ntBASIC21.16■□□□□ 0.98
NKAIN3Q8N8D7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NKAIN3Q8N8D7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NKAIN3Q8N8D7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NKAIN3Q8N8D7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NKAIN3Q8N8D7 AC044849.2-201ENST00000606596 710 ntBASIC21.15■□□□□ 0.98
NKAIN3Q8N8D7 AC010501.1-201ENST00000606270 1962 ntBASIC21.15■□□□□ 0.98
NKAIN3Q8N8D7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NKAIN3Q8N8D7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
NKAIN3Q8N8D7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NKAIN3Q8N8D7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.14■□□□□ 0.98
NKAIN3Q8N8D7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
NKAIN3Q8N8D7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NKAIN3Q8N8D7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NKAIN3Q8N8D7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NKAIN3Q8N8D7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.13■□□□□ 0.97
NKAIN3Q8N8D7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.13■□□□□ 0.97
NKAIN3Q8N8D7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NKAIN3Q8N8D7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.13■□□□□ 0.97
NKAIN3Q8N8D7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKAIN3Q8N8D7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.12■□□□□ 0.97
NKAIN3Q8N8D7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NKAIN3Q8N8D7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms