Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 WHAMMP3-201ENST00000611636 1609 ntBASIC20.66■□□□□ 0.9
TPRX1Q8N7U7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPRX1Q8N7U7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRX1Q8N7U7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRX1Q8N7U7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.65■□□□□ 0.9
TPRX1Q8N7U7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPRX1Q8N7U7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.65■□□□□ 0.9
TPRX1Q8N7U7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.65■□□□□ 0.9
TPRX1Q8N7U7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TPRX1Q8N7U7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPRX1Q8N7U7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPRX1Q8N7U7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TPRX1Q8N7U7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPRX1Q8N7U7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TPRX1Q8N7U7 AC148477.6-201ENST00000623746 465 ntBASIC20.63■□□□□ 0.89
TPRX1Q8N7U7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPRX1Q8N7U7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.62■□□□□ 0.89
TPRX1Q8N7U7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.62■□□□□ 0.89
TPRX1Q8N7U7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.62■□□□□ 0.89
TPRX1Q8N7U7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.62■□□□□ 0.89
TPRX1Q8N7U7 AP004609.3-201ENST00000610705 1884 ntBASIC20.62■□□□□ 0.89
TPRX1Q8N7U7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRX1Q8N7U7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRX1Q8N7U7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPRX1Q8N7U7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRX1Q8N7U7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.61■□□□□ 0.89
TPRX1Q8N7U7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.61■□□□□ 0.89
TPRX1Q8N7U7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TPRX1Q8N7U7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPRX1Q8N7U7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.6■□□□□ 0.89
TPRX1Q8N7U7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.6■□□□□ 0.89
TPRX1Q8N7U7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPRX1Q8N7U7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPRX1Q8N7U7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.59■□□□□ 0.89
TPRX1Q8N7U7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPRX1Q8N7U7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPRX1Q8N7U7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPRX1Q8N7U7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPRX1Q8N7U7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
TPRX1Q8N7U7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPRX1Q8N7U7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.58■□□□□ 0.89
TPRX1Q8N7U7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPRX1Q8N7U7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
TPRX1Q8N7U7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.58■□□□□ 0.89
TPRX1Q8N7U7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
TPRX1Q8N7U7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TPRX1Q8N7U7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TPRX1Q8N7U7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.58■□□□□ 0.88
TPRX1Q8N7U7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPRX1Q8N7U7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TPRX1Q8N7U7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.56■□□□□ 0.88
TPRX1Q8N7U7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPRX1Q8N7U7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TPRX1Q8N7U7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TPRX1Q8N7U7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TPRX1Q8N7U7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TPRX1Q8N7U7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TPRX1Q8N7U7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.55■□□□□ 0.88
TPRX1Q8N7U7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TPRX1Q8N7U7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.55■□□□□ 0.88
TPRX1Q8N7U7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TPRX1Q8N7U7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TPRX1Q8N7U7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.54■□□□□ 0.88
TPRX1Q8N7U7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.54■□□□□ 0.88
TPRX1Q8N7U7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TPRX1Q8N7U7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TPRX1Q8N7U7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TPRX1Q8N7U7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TPRX1Q8N7U7 AL359258.2-201ENST00000564063 1566 ntBASIC20.53■□□□□ 0.88
TPRX1Q8N7U7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TPRX1Q8N7U7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TPRX1Q8N7U7 MIR639-201ENST00000384974 98 ntBASIC20.52■□□□□ 0.88
TPRX1Q8N7U7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.52■□□□□ 0.88
TPRX1Q8N7U7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
TPRX1Q8N7U7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TPRX1Q8N7U7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TPRX1Q8N7U7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.51■□□□□ 0.87
TPRX1Q8N7U7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.51■□□□□ 0.87
TPRX1Q8N7U7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TPRX1Q8N7U7 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.51■□□□□ 0.87
TPRX1Q8N7U7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TPRX1Q8N7U7 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.51■□□□□ 0.87
TPRX1Q8N7U7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TPRX1Q8N7U7 AC142472.1-201ENST00000612013 1741 ntBASIC20.5■□□□□ 0.87
TPRX1Q8N7U7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TPRX1Q8N7U7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TPRX1Q8N7U7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TPRX1Q8N7U7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.5■□□□□ 0.87
TPRX1Q8N7U7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.49■□□□□ 0.87
TPRX1Q8N7U7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.49■□□□□ 0.87
TPRX1Q8N7U7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms