Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC9BQ8N6N2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC9BQ8N6N2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
TTC9BQ8N6N2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TTC9BQ8N6N2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TTC9BQ8N6N2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TTC9BQ8N6N2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
TTC9BQ8N6N2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.22■■□□□ 1.79
TTC9BQ8N6N2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TTC9BQ8N6N2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TTC9BQ8N6N2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
TTC9BQ8N6N2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.21■■□□□ 1.79
TTC9BQ8N6N2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TTC9BQ8N6N2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC9BQ8N6N2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC9BQ8N6N2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
TTC9BQ8N6N2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TTC9BQ8N6N2 AC004987.1-201ENST00000428627 508 ntBASIC26.2■■□□□ 1.78
TTC9BQ8N6N2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TTC9BQ8N6N2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC9BQ8N6N2 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.19■■□□□ 1.78
TTC9BQ8N6N2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
TTC9BQ8N6N2 AC133552.2-201ENST00000619106 1032 ntBASIC26.18■■□□□ 1.78
TTC9BQ8N6N2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.18■■□□□ 1.78
TTC9BQ8N6N2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC9BQ8N6N2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC9BQ8N6N2 ATP5G2P3-201ENST00000429083 425 ntBASIC26.17■■□□□ 1.78
TTC9BQ8N6N2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.17■■□□□ 1.78
TTC9BQ8N6N2 AL592293.1-201ENST00000502889 1188 ntBASIC26.17■■□□□ 1.78
TTC9BQ8N6N2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TTC9BQ8N6N2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
TTC9BQ8N6N2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.17■■□□□ 1.78
TTC9BQ8N6N2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.17■■□□□ 1.78
TTC9BQ8N6N2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TTC9BQ8N6N2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
TTC9BQ8N6N2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TTC9BQ8N6N2 AC026202.3-201ENST00000600805 1127 ntBASIC26.16■■□□□ 1.78
TTC9BQ8N6N2 WHAMMP3-201ENST00000611636 1609 ntBASIC26.16■■□□□ 1.78
TTC9BQ8N6N2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TTC9BQ8N6N2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TTC9BQ8N6N2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC9BQ8N6N2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
TTC9BQ8N6N2 TSPY13P-201ENST00000338964 914 ntBASIC26.14■■□□□ 1.78
TTC9BQ8N6N2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TTC9BQ8N6N2 AC093536.1-201ENST00000569153 554 ntBASIC26.14■■□□□ 1.78
TTC9BQ8N6N2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.14■■□□□ 1.78
TTC9BQ8N6N2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
TTC9BQ8N6N2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC9BQ8N6N2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
TTC9BQ8N6N2 AL359504.2-201ENST00000605506 1601 ntBASIC26.14■■□□□ 1.77
TTC9BQ8N6N2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TTC9BQ8N6N2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TTC9BQ8N6N2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
TTC9BQ8N6N2 RP9P-202ENST00000450133 1212 ntBASIC26.13■■□□□ 1.77
TTC9BQ8N6N2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.13■■□□□ 1.77
TTC9BQ8N6N2 AC129492.7-201ENST00000622992 756 ntBASIC26.13■■□□□ 1.77
TTC9BQ8N6N2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
TTC9BQ8N6N2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.12■■□□□ 1.77
TTC9BQ8N6N2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TTC9BQ8N6N2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.12■■□□□ 1.77
TTC9BQ8N6N2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC9BQ8N6N2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.12■■□□□ 1.77
TTC9BQ8N6N2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TTC9BQ8N6N2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TTC9BQ8N6N2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
TTC9BQ8N6N2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TTC9BQ8N6N2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
TTC9BQ8N6N2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TTC9BQ8N6N2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC9BQ8N6N2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC9BQ8N6N2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.09■■□□□ 1.77
TTC9BQ8N6N2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC9BQ8N6N2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.09■■□□□ 1.77
TTC9BQ8N6N2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TTC9BQ8N6N2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TTC9BQ8N6N2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
TTC9BQ8N6N2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
TTC9BQ8N6N2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.08■■□□□ 1.77
TTC9BQ8N6N2 RAP2CP1-202ENST00000605179 643 ntBASIC26.08■■□□□ 1.77
TTC9BQ8N6N2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TTC9BQ8N6N2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC9BQ8N6N2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC9BQ8N6N2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TTC9BQ8N6N2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
TTC9BQ8N6N2 LINC01003-201ENST00000564834 1764 ntBASIC26.07■■□□□ 1.76
TTC9BQ8N6N2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC9BQ8N6N2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
TTC9BQ8N6N2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC9BQ8N6N2 DUX4L18-201ENST00000553347 1267 ntBASIC26.06■■□□□ 1.76
TTC9BQ8N6N2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.06■■□□□ 1.76
TTC9BQ8N6N2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.06■■□□□ 1.76
TTC9BQ8N6N2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TTC9BQ8N6N2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TTC9BQ8N6N2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
TTC9BQ8N6N2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
TTC9BQ8N6N2 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.05■■□□□ 1.76
TTC9BQ8N6N2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.05■■□□□ 1.76
TTC9BQ8N6N2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.05■■□□□ 1.76
TTC9BQ8N6N2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TTC9BQ8N6N2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms