Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC44A2Q8IWA5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.35■■□□□ 1.33
SLC44A2Q8IWA5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLC44A2Q8IWA5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC44A2Q8IWA5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SLC44A2Q8IWA5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC44A2Q8IWA5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SLC44A2Q8IWA5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLC44A2Q8IWA5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC44A2Q8IWA5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.34■■□□□ 1.33
SLC44A2Q8IWA5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLC44A2Q8IWA5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC44A2Q8IWA5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC44A2Q8IWA5 AC135731.1-201ENST00000569415 2548 ntBASIC23.32■■□□□ 1.32
SLC44A2Q8IWA5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SLC44A2Q8IWA5 AC016575.1-201ENST00000607026 382 ntBASIC23.32■■□□□ 1.32
SLC44A2Q8IWA5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.32■■□□□ 1.32
SLC44A2Q8IWA5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.32■■□□□ 1.32
SLC44A2Q8IWA5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLC44A2Q8IWA5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.31■■□□□ 1.32
SLC44A2Q8IWA5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC44A2Q8IWA5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC44A2Q8IWA5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SLC44A2Q8IWA5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC44A2Q8IWA5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC44A2Q8IWA5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.3■■□□□ 1.32
SLC44A2Q8IWA5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SLC44A2Q8IWA5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SLC44A2Q8IWA5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC44A2Q8IWA5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC44A2Q8IWA5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SLC44A2Q8IWA5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.29■■□□□ 1.32
SLC44A2Q8IWA5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC44A2Q8IWA5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 AC008813.1-201ENST00000536597 885 ntBASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC44A2Q8IWA5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC44A2Q8IWA5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SLC44A2Q8IWA5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC44A2Q8IWA5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC44A2Q8IWA5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.27■■□□□ 1.32
SLC44A2Q8IWA5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLC44A2Q8IWA5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
SLC44A2Q8IWA5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLC44A2Q8IWA5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SLC44A2Q8IWA5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC44A2Q8IWA5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SLC44A2Q8IWA5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.24■■□□□ 1.31
SLC44A2Q8IWA5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SLC44A2Q8IWA5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC44A2Q8IWA5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.23■■□□□ 1.31
SLC44A2Q8IWA5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC44A2Q8IWA5 HLA-V-202ENST00000446817 847 ntBASIC23.23■■□□□ 1.31
SLC44A2Q8IWA5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLC44A2Q8IWA5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SLC44A2Q8IWA5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
SLC44A2Q8IWA5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC44A2Q8IWA5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.22■■□□□ 1.31
SLC44A2Q8IWA5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.22■■□□□ 1.31
SLC44A2Q8IWA5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SLC44A2Q8IWA5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.21■■□□□ 1.31
SLC44A2Q8IWA5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.21■■□□□ 1.31
SLC44A2Q8IWA5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SLC44A2Q8IWA5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SLC44A2Q8IWA5 AL449106.1-201ENST00000608517 1980 ntBASIC23.21■■□□□ 1.31
SLC44A2Q8IWA5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.31
SLC44A2Q8IWA5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.2■■□□□ 1.3
SLC44A2Q8IWA5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SLC44A2Q8IWA5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.2■■□□□ 1.3
SLC44A2Q8IWA5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SLC44A2Q8IWA5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A2Q8IWA5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A2Q8IWA5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A2Q8IWA5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A2Q8IWA5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.19■■□□□ 1.3
SLC44A2Q8IWA5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC44A2Q8IWA5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC44A2Q8IWA5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC44A2Q8IWA5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC44A2Q8IWA5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SLC44A2Q8IWA5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.17■■□□□ 1.3
SLC44A2Q8IWA5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A2Q8IWA5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A2Q8IWA5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.17■■□□□ 1.3
SLC44A2Q8IWA5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC44A2Q8IWA5 AP004609.3-201ENST00000610705 1884 ntBASIC23.17■■□□□ 1.3
SLC44A2Q8IWA5 MIR219A2-201ENST00000608502 1504 ntBASIC23.17■■□□□ 1.3
SLC44A2Q8IWA5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.16■■□□□ 1.3
SLC44A2Q8IWA5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC44A2Q8IWA5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC44A2Q8IWA5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC44A2Q8IWA5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC44A2Q8IWA5 AC148477.6-201ENST00000623746 465 ntBASIC23.16■■□□□ 1.3
SLC44A2Q8IWA5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms