Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAI1Q7Z5J4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RAI1Q7Z5J4 AC093536.1-201ENST00000569153 554 ntBASIC21.38■■□□□ 1.01
RAI1Q7Z5J4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAI1Q7Z5J4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 RAP2CP1-202ENST00000605179 643 ntBASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAI1Q7Z5J4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.36■■□□□ 1.01
RAI1Q7Z5J4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAI1Q7Z5J4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RAI1Q7Z5J4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.35■■□□□ 1.01
RAI1Q7Z5J4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI1Q7Z5J4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 DUX4L9-201ENST00000449051 1259 ntBASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 SMPD5-203ENST00000639008 1464 ntBASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.33■■□□□ 1.01
RAI1Q7Z5J4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RAI1Q7Z5J4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RAI1Q7Z5J4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
RAI1Q7Z5J4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI1Q7Z5J4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI1Q7Z5J4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RAI1Q7Z5J4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.32■■□□□ 1
RAI1Q7Z5J4 AL451085.2-201ENST00000605085 799 ntBASIC21.32■■□□□ 1
RAI1Q7Z5J4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.32■■□□□ 1
RAI1Q7Z5J4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI1Q7Z5J4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.31■■□□□ 1
RAI1Q7Z5J4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.31■■□□□ 1
RAI1Q7Z5J4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAI1Q7Z5J4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAI1Q7Z5J4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAI1Q7Z5J4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAI1Q7Z5J4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAI1Q7Z5J4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAI1Q7Z5J4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAI1Q7Z5J4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RAI1Q7Z5J4 SPCS2P3-201ENST00000500401 656 ntBASIC21.3■■□□□ 1
RAI1Q7Z5J4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.3■■□□□ 1
RAI1Q7Z5J4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RAI1Q7Z5J4 AL359258.2-201ENST00000564063 1566 ntBASIC21.3■■□□□ 1
RAI1Q7Z5J4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAI1Q7Z5J4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.29■■□□□ 1
RAI1Q7Z5J4 AP002414.2-202ENST00000590929 1450 ntBASIC21.29■■□□□ 1
RAI1Q7Z5J4 AC026202.3-201ENST00000600805 1127 ntBASIC21.29■■□□□ 1
RAI1Q7Z5J4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.29■■□□□ 1
RAI1Q7Z5J4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.28■■□□□ 1
RAI1Q7Z5J4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.28■■□□□ 1
RAI1Q7Z5J4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
RAI1Q7Z5J4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAI1Q7Z5J4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RAI1Q7Z5J4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAI1Q7Z5J4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAI1Q7Z5J4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RAI1Q7Z5J4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAI1Q7Z5J4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAI1Q7Z5J4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RAI1Q7Z5J4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.27■■□□□ 1
RAI1Q7Z5J4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAI1Q7Z5J4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 RP9P-202ENST00000450133 1212 ntBASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.25■□□□□ 0.99
RAI1Q7Z5J4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAI1Q7Z5J4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms