Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
COPS6Q7L5N1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
COPS6Q7L5N1 AC133552.2-201ENST00000619106 1032 ntBASIC31.63■■■□□ 2.65
COPS6Q7L5N1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.63■■■□□ 2.65
COPS6Q7L5N1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COPS6Q7L5N1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COPS6Q7L5N1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COPS6Q7L5N1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
COPS6Q7L5N1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
COPS6Q7L5N1 ATP5G2P3-201ENST00000429083 425 ntBASIC31.61■■■□□ 2.65
COPS6Q7L5N1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.61■■■□□ 2.65
COPS6Q7L5N1 AC026202.3-201ENST00000600805 1127 ntBASIC31.61■■■□□ 2.65
COPS6Q7L5N1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
COPS6Q7L5N1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COPS6Q7L5N1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COPS6Q7L5N1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.6■■■□□ 2.65
COPS6Q7L5N1 AL592293.1-201ENST00000502889 1188 ntBASIC31.6■■■□□ 2.65
COPS6Q7L5N1 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.6■■■□□ 2.65
COPS6Q7L5N1 TSPY13P-201ENST00000338964 914 ntBASIC31.59■■■□□ 2.65
COPS6Q7L5N1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
COPS6Q7L5N1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
COPS6Q7L5N1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
COPS6Q7L5N1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
COPS6Q7L5N1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
COPS6Q7L5N1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
COPS6Q7L5N1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
COPS6Q7L5N1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.57■■■□□ 2.64
COPS6Q7L5N1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
COPS6Q7L5N1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
COPS6Q7L5N1 RP9P-202ENST00000450133 1212 ntBASIC31.56■■■□□ 2.64
COPS6Q7L5N1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
COPS6Q7L5N1 AC129492.7-201ENST00000622992 756 ntBASIC31.56■■■□□ 2.64
COPS6Q7L5N1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
COPS6Q7L5N1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
COPS6Q7L5N1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
COPS6Q7L5N1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
COPS6Q7L5N1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
COPS6Q7L5N1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
COPS6Q7L5N1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
COPS6Q7L5N1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
COPS6Q7L5N1 WHAMMP3-201ENST00000611636 1609 ntBASIC31.53■■■□□ 2.64
COPS6Q7L5N1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.53■■■□□ 2.64
COPS6Q7L5N1 AC093536.1-201ENST00000569153 554 ntBASIC31.53■■■□□ 2.64
COPS6Q7L5N1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.53■■■□□ 2.64
COPS6Q7L5N1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
COPS6Q7L5N1 AL359504.2-201ENST00000605506 1601 ntBASIC31.53■■■□□ 2.64
COPS6Q7L5N1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COPS6Q7L5N1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
COPS6Q7L5N1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
COPS6Q7L5N1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
COPS6Q7L5N1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.52■■■□□ 2.64
COPS6Q7L5N1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
COPS6Q7L5N1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
COPS6Q7L5N1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.51■■■□□ 2.63
COPS6Q7L5N1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
COPS6Q7L5N1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
COPS6Q7L5N1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
COPS6Q7L5N1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.49■■■□□ 2.63
COPS6Q7L5N1 RAP2CP1-202ENST00000605179 643 ntBASIC31.49■■■□□ 2.63
COPS6Q7L5N1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.49■■■□□ 2.63
COPS6Q7L5N1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
COPS6Q7L5N1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
COPS6Q7L5N1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
COPS6Q7L5N1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
COPS6Q7L5N1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
COPS6Q7L5N1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COPS6Q7L5N1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COPS6Q7L5N1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
COPS6Q7L5N1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.48■■■□□ 2.63
COPS6Q7L5N1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.47■■■□□ 2.63
COPS6Q7L5N1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
COPS6Q7L5N1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
COPS6Q7L5N1 MIR3960-201ENST00000583311 91 ntBASIC31.47■■■□□ 2.63
COPS6Q7L5N1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
COPS6Q7L5N1 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.46■■■□□ 2.63
COPS6Q7L5N1 DUX4L18-201ENST00000553347 1267 ntBASIC31.46■■■□□ 2.63
COPS6Q7L5N1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.46■■■□□ 2.63
COPS6Q7L5N1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
COPS6Q7L5N1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
COPS6Q7L5N1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.63
COPS6Q7L5N1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
COPS6Q7L5N1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
COPS6Q7L5N1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
COPS6Q7L5N1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
COPS6Q7L5N1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
COPS6Q7L5N1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.42■■■□□ 2.62
COPS6Q7L5N1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.42■■■□□ 2.62
COPS6Q7L5N1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
COPS6Q7L5N1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
COPS6Q7L5N1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
COPS6Q7L5N1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
COPS6Q7L5N1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
COPS6Q7L5N1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.4■■■□□ 2.62
COPS6Q7L5N1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
COPS6Q7L5N1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.39■■■□□ 2.62
COPS6Q7L5N1 SPCS2P3-201ENST00000500401 656 ntBASIC31.39■■■□□ 2.62
COPS6Q7L5N1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
COPS6Q7L5N1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
COPS6Q7L5N1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
COPS6Q7L5N1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms