Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AL139393.2-201ENST00000608721 2025 ntBASIC31.24■■■□□ 2.59
PRPF40BQ6NWY9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PRPF40BQ6NWY9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
PRPF40BQ6NWY9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
PRPF40BQ6NWY9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PRPF40BQ6NWY9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PRPF40BQ6NWY9 DUX4L9-201ENST00000449051 1259 ntBASIC31.23■■■□□ 2.59
PRPF40BQ6NWY9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
PRPF40BQ6NWY9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.22■■■□□ 2.59
PRPF40BQ6NWY9 AL359258.2-201ENST00000564063 1566 ntBASIC31.22■■■□□ 2.59
PRPF40BQ6NWY9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PRPF40BQ6NWY9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.2■■■□□ 2.59
PRPF40BQ6NWY9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.2■■■□□ 2.59
PRPF40BQ6NWY9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
PRPF40BQ6NWY9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.19■■■□□ 2.58
PRPF40BQ6NWY9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PRPF40BQ6NWY9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PRPF40BQ6NWY9 AC025884.2-201ENST00000553429 711 ntBASIC31.18■■■□□ 2.58
PRPF40BQ6NWY9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.18■■■□□ 2.58
PRPF40BQ6NWY9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.18■■■□□ 2.58
PRPF40BQ6NWY9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 AC010980.1-201ENST00000587192 1142 ntBASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
PRPF40BQ6NWY9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PRPF40BQ6NWY9 AL592295.1-201ENST00000400984 884 ntBASIC31.16■■■□□ 2.58
PRPF40BQ6NWY9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
PRPF40BQ6NWY9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.15■■■□□ 2.58
PRPF40BQ6NWY9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PRPF40BQ6NWY9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
PRPF40BQ6NWY9 BHLHE23-202ENST00000612929 1109 ntBASIC31.14■■■□□ 2.58
PRPF40BQ6NWY9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.13■■■□□ 2.57
PRPF40BQ6NWY9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.13■■■□□ 2.57
PRPF40BQ6NWY9 SPCS2P3-201ENST00000500401 656 ntBASIC31.13■■■□□ 2.57
PRPF40BQ6NWY9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
PRPF40BQ6NWY9 KRT8P33-201ENST00000508125 1423 ntBASIC31.13■■■□□ 2.57
PRPF40BQ6NWY9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.13■■■□□ 2.57
PRPF40BQ6NWY9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
PRPF40BQ6NWY9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PRPF40BQ6NWY9 RP9P-202ENST00000450133 1212 ntBASIC31.12■■■□□ 2.57
PRPF40BQ6NWY9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.12■■■□□ 2.57
PRPF40BQ6NWY9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PRPF40BQ6NWY9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PRPF40BQ6NWY9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PRPF40BQ6NWY9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
PRPF40BQ6NWY9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PRPF40BQ6NWY9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PRPF40BQ6NWY9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.11■■■□□ 2.57
PRPF40BQ6NWY9 RAP2CP1-202ENST00000605179 643 ntBASIC31.11■■■□□ 2.57
PRPF40BQ6NWY9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PRPF40BQ6NWY9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
PRPF40BQ6NWY9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PRPF40BQ6NWY9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PRPF40BQ6NWY9 AC093536.1-201ENST00000569153 554 ntBASIC31.1■■■□□ 2.57
PRPF40BQ6NWY9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PRPF40BQ6NWY9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PRPF40BQ6NWY9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PRPF40BQ6NWY9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PRPF40BQ6NWY9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PRPF40BQ6NWY9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.08■■■□□ 2.57
PRPF40BQ6NWY9 AC009299.2-201ENST00000482477 511 ntBASIC31.08■■■□□ 2.57
PRPF40BQ6NWY9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.08■■■□□ 2.57
PRPF40BQ6NWY9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.07■■■□□ 2.57
PRPF40BQ6NWY9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.07■■■□□ 2.56
PRPF40BQ6NWY9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PRPF40BQ6NWY9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PRPF40BQ6NWY9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.07■■■□□ 2.56
PRPF40BQ6NWY9 AC100797.4-201ENST00000631653 1827 ntBASIC31.06■■■□□ 2.56
PRPF40BQ6NWY9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PRPF40BQ6NWY9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.06■■■□□ 2.56
PRPF40BQ6NWY9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
PRPF40BQ6NWY9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PRPF40BQ6NWY9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
PRPF40BQ6NWY9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
PRPF40BQ6NWY9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PRPF40BQ6NWY9 AC074183.2-201ENST00000623112 922 ntBASIC31.05■■■□□ 2.56
PRPF40BQ6NWY9 AP004833.2-201ENST00000532228 1454 ntBASIC31.05■■■□□ 2.56
PRPF40BQ6NWY9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
PRPF40BQ6NWY9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PRPF40BQ6NWY9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
PRPF40BQ6NWY9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
PRPF40BQ6NWY9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
PRPF40BQ6NWY9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PRPF40BQ6NWY9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.04■■■□□ 2.56
PRPF40BQ6NWY9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.04■■■□□ 2.56
PRPF40BQ6NWY9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PRPF40BQ6NWY9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
PRPF40BQ6NWY9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.04■■■□□ 2.56
PRPF40BQ6NWY9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PRPF40BQ6NWY9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PRPF40BQ6NWY9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.03■■■□□ 2.56
PRPF40BQ6NWY9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.03■■■□□ 2.56
PRPF40BQ6NWY9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
PRPF40BQ6NWY9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms