Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF213Q63HN8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF213Q63HN8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF213Q63HN8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF213Q63HN8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF213Q63HN8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF213Q63HN8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF213Q63HN8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF213Q63HN8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF213Q63HN8 MIR4466-201ENST00000606121 54 ntBASIC13.69□□□□□ -0.22
RNF213Q63HN8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF213Q63HN8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF213Q63HN8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF213Q63HN8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF213Q63HN8 AC087623.3-201ENST00000607047 1098 ntBASIC13.68□□□□□ -0.22
RNF213Q63HN8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF213Q63HN8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.68□□□□□ -0.22
RNF213Q63HN8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF213Q63HN8 AC018755.3-202ENST00000596210 929 ntBASIC13.67□□□□□ -0.22
RNF213Q63HN8 RARRES2P11-201ENST00000635158 484 ntBASIC13.67□□□□□ -0.22
RNF213Q63HN8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RNF213Q63HN8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF213Q63HN8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RNF213Q63HN8 AC126177.7-201ENST00000547904 679 ntBASIC13.67□□□□□ -0.22
RNF213Q63HN8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF213Q63HN8 LONRF2P2-201ENST00000439212 571 ntBASIC13.66□□□□□ -0.22
RNF213Q63HN8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC13.66□□□□□ -0.22
RNF213Q63HN8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF213Q63HN8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNF213Q63HN8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.66□□□□□ -0.22
RNF213Q63HN8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC13.66□□□□□ -0.22
RNF213Q63HN8 KRT16P3-201ENST00000439127 1283 ntBASIC13.66□□□□□ -0.22
RNF213Q63HN8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.66□□□□□ -0.22
RNF213Q63HN8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RNF213Q63HN8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.65□□□□□ -0.22
RNF213Q63HN8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF213Q63HN8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
RNF213Q63HN8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RNF213Q63HN8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF213Q63HN8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF213Q63HN8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RNF213Q63HN8 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.64□□□□□ -0.23
RNF213Q63HN8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF213Q63HN8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF213Q63HN8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF213Q63HN8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
RNF213Q63HN8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF213Q63HN8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF213Q63HN8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF213Q63HN8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF213Q63HN8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF213Q63HN8 AL031432.3-201ENST00000607698 485 ntBASIC13.63□□□□□ -0.23
RNF213Q63HN8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNF213Q63HN8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF213Q63HN8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RNF213Q63HN8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RNF213Q63HN8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF213Q63HN8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF213Q63HN8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF213Q63HN8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF213Q63HN8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF213Q63HN8 SUDS3P1-201ENST00000505831 966 ntBASIC13.62□□□□□ -0.23
RNF213Q63HN8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RNF213Q63HN8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF213Q63HN8 MIR6821-201ENST00000617625 74 ntBASIC13.62□□□□□ -0.23
RNF213Q63HN8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF213Q63HN8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF213Q63HN8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF213Q63HN8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF213Q63HN8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF213Q63HN8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
RNF213Q63HN8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RNF213Q63HN8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF213Q63HN8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF213Q63HN8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF213Q63HN8 AC097381.1-201ENST00000429019 1296 ntBASIC13.61□□□□□ -0.23
RNF213Q63HN8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF213Q63HN8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF213Q63HN8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.6□□□□□ -0.23
RNF213Q63HN8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.6□□□□□ -0.23
RNF213Q63HN8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF213Q63HN8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF213Q63HN8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF213Q63HN8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RNF213Q63HN8 AC142381.2-201ENST00000566120 298 ntBASIC13.6□□□□□ -0.23
RNF213Q63HN8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF213Q63HN8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF213Q63HN8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF213Q63HN8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF213Q63HN8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF213Q63HN8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF213Q63HN8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC13.59□□□□□ -0.23
RNF213Q63HN8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF213Q63HN8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF213Q63HN8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.59□□□□□ -0.23
RNF213Q63HN8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF213Q63HN8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF213Q63HN8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF213Q63HN8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF213Q63HN8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms