Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC093536.1-201ENST00000569153 554 ntBASIC29.05■■■□□ 2.24
COL13A1Q5TAT6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
COL13A1Q5TAT6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.04■■■□□ 2.24
COL13A1Q5TAT6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.04■■■□□ 2.24
COL13A1Q5TAT6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
COL13A1Q5TAT6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL13A1Q5TAT6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.03■■■□□ 2.24
COL13A1Q5TAT6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.03■■■□□ 2.24
COL13A1Q5TAT6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.03■■■□□ 2.24
COL13A1Q5TAT6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.03■■■□□ 2.24
COL13A1Q5TAT6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.03■■■□□ 2.24
COL13A1Q5TAT6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
COL13A1Q5TAT6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
COL13A1Q5TAT6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.01■■■□□ 2.23
COL13A1Q5TAT6 AC090192.1-201ENST00000517740 490 ntBASIC29.01■■■□□ 2.23
COL13A1Q5TAT6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29■■■□□ 2.23
COL13A1Q5TAT6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29■■■□□ 2.23
COL13A1Q5TAT6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL13A1Q5TAT6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.99■■■□□ 2.23
COL13A1Q5TAT6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
COL13A1Q5TAT6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.99■■■□□ 2.23
COL13A1Q5TAT6 ESRRAP2-201ENST00000418437 1549 ntBASIC28.99■■■□□ 2.23
COL13A1Q5TAT6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
COL13A1Q5TAT6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
COL13A1Q5TAT6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
COL13A1Q5TAT6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
COL13A1Q5TAT6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
COL13A1Q5TAT6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.96■■■□□ 2.23
COL13A1Q5TAT6 AC135983.2-203ENST00000454486 1613 ntBASIC28.95■■■□□ 2.23
COL13A1Q5TAT6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
COL13A1Q5TAT6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.95■■■□□ 2.22
COL13A1Q5TAT6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
COL13A1Q5TAT6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL13A1Q5TAT6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL13A1Q5TAT6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.94■■■□□ 2.22
COL13A1Q5TAT6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL13A1Q5TAT6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.93■■■□□ 2.22
COL13A1Q5TAT6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL13A1Q5TAT6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
COL13A1Q5TAT6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.93■■■□□ 2.22
COL13A1Q5TAT6 BX664725.1-201ENST00000438252 379 ntBASIC28.92■■■□□ 2.22
COL13A1Q5TAT6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.92■■■□□ 2.22
COL13A1Q5TAT6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
COL13A1Q5TAT6 AC142381.2-201ENST00000566120 298 ntBASIC28.92■■■□□ 2.22
COL13A1Q5TAT6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.92■■■□□ 2.22
COL13A1Q5TAT6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL13A1Q5TAT6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL13A1Q5TAT6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
COL13A1Q5TAT6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
COL13A1Q5TAT6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.91■■■□□ 2.22
COL13A1Q5TAT6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
COL13A1Q5TAT6 TSPY9P-201ENST00000440215 945 ntBASIC28.91■■■□□ 2.22
COL13A1Q5TAT6 TSPY11P-201ENST00000442607 1045 ntBASIC28.91■■■□□ 2.22
COL13A1Q5TAT6 RARRES2P11-201ENST00000635158 484 ntBASIC28.91■■■□□ 2.22
COL13A1Q5TAT6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL13A1Q5TAT6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
COL13A1Q5TAT6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
COL13A1Q5TAT6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.9■■■□□ 2.22
COL13A1Q5TAT6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.9■■■□□ 2.22
COL13A1Q5TAT6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
COL13A1Q5TAT6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.21
COL13A1Q5TAT6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL13A1Q5TAT6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.88■■■□□ 2.21
COL13A1Q5TAT6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL13A1Q5TAT6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.87■■■□□ 2.21
COL13A1Q5TAT6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL13A1Q5TAT6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.86■■■□□ 2.21
COL13A1Q5TAT6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.86■■■□□ 2.21
COL13A1Q5TAT6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.86■■■□□ 2.21
COL13A1Q5TAT6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL13A1Q5TAT6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.85■■■□□ 2.21
COL13A1Q5TAT6 AL162430.1-201ENST00000480705 870 ntBASIC28.85■■■□□ 2.21
COL13A1Q5TAT6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COL13A1Q5TAT6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL13A1Q5TAT6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
COL13A1Q5TAT6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL13A1Q5TAT6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL13A1Q5TAT6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COL13A1Q5TAT6 AC019171.1-201ENST00000601251 1056 ntBASIC28.83■■■□□ 2.21
COL13A1Q5TAT6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.83■■■□□ 2.21
COL13A1Q5TAT6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
COL13A1Q5TAT6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL13A1Q5TAT6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.82■■■□□ 2.2
COL13A1Q5TAT6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL13A1Q5TAT6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL13A1Q5TAT6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.81■■■□□ 2.2
COL13A1Q5TAT6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.81■■■□□ 2.2
COL13A1Q5TAT6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
COL13A1Q5TAT6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL13A1Q5TAT6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
COL13A1Q5TAT6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC28.79■■■□□ 2.2
COL13A1Q5TAT6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 323.1 ms