Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.92■■□□□ 1.42
SGO1Q5FBB7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SGO1Q5FBB7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.91■■□□□ 1.42
SGO1Q5FBB7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SGO1Q5FBB7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SGO1Q5FBB7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SGO1Q5FBB7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.91■■□□□ 1.42
SGO1Q5FBB7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SGO1Q5FBB7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SGO1Q5FBB7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
SGO1Q5FBB7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SGO1Q5FBB7 WHAMMP3-201ENST00000611636 1609 ntBASIC23.9■■□□□ 1.42
SGO1Q5FBB7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.9■■□□□ 1.42
SGO1Q5FBB7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SGO1Q5FBB7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SGO1Q5FBB7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
SGO1Q5FBB7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.88■■□□□ 1.41
SGO1Q5FBB7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SGO1Q5FBB7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SGO1Q5FBB7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.87■■□□□ 1.41
SGO1Q5FBB7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
SGO1Q5FBB7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
SGO1Q5FBB7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.86■■□□□ 1.41
SGO1Q5FBB7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.86■■□□□ 1.41
SGO1Q5FBB7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SGO1Q5FBB7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.86■■□□□ 1.41
SGO1Q5FBB7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SGO1Q5FBB7 AC091060.1-201ENST00000623524 1766 ntBASIC23.86■■□□□ 1.41
SGO1Q5FBB7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.85■■□□□ 1.41
SGO1Q5FBB7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SGO1Q5FBB7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SGO1Q5FBB7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SGO1Q5FBB7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
SGO1Q5FBB7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.83■■□□□ 1.41
SGO1Q5FBB7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.83■■□□□ 1.41
SGO1Q5FBB7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SGO1Q5FBB7 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.83■■□□□ 1.41
SGO1Q5FBB7 ABHD17AP4-201ENST00000411545 909 ntBASIC23.83■■□□□ 1.41
SGO1Q5FBB7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.83■■□□□ 1.41
SGO1Q5FBB7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SGO1Q5FBB7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SGO1Q5FBB7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SGO1Q5FBB7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.82■■□□□ 1.4
SGO1Q5FBB7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SGO1Q5FBB7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SGO1Q5FBB7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SGO1Q5FBB7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SGO1Q5FBB7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SGO1Q5FBB7 AC142472.1-201ENST00000612013 1741 ntBASIC23.79■■□□□ 1.4
SGO1Q5FBB7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.79■■□□□ 1.4
SGO1Q5FBB7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SGO1Q5FBB7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.78■■□□□ 1.4
SGO1Q5FBB7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SGO1Q5FBB7 AC008813.1-201ENST00000536597 885 ntBASIC23.78■■□□□ 1.4
SGO1Q5FBB7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SGO1Q5FBB7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.78■■□□□ 1.4
SGO1Q5FBB7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SGO1Q5FBB7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.77■■□□□ 1.4
SGO1Q5FBB7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SGO1Q5FBB7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SGO1Q5FBB7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SGO1Q5FBB7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SGO1Q5FBB7 MIR219A2-201ENST00000608502 1504 ntBASIC23.76■■□□□ 1.39
SGO1Q5FBB7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SGO1Q5FBB7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.76■■□□□ 1.39
SGO1Q5FBB7 HLA-V-202ENST00000446817 847 ntBASIC23.76■■□□□ 1.39
SGO1Q5FBB7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SGO1Q5FBB7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SGO1Q5FBB7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SGO1Q5FBB7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
SGO1Q5FBB7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SGO1Q5FBB7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SGO1Q5FBB7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SGO1Q5FBB7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SGO1Q5FBB7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.74■■□□□ 1.39
SGO1Q5FBB7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SGO1Q5FBB7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SGO1Q5FBB7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.74■■□□□ 1.39
SGO1Q5FBB7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SGO1Q5FBB7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.74■■□□□ 1.39
SGO1Q5FBB7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SGO1Q5FBB7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.73■■□□□ 1.39
SGO1Q5FBB7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.73■■□□□ 1.39
SGO1Q5FBB7 CR559946.2-201ENST00000623684 991 ntBASIC23.73■■□□□ 1.39
SGO1Q5FBB7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SGO1Q5FBB7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SGO1Q5FBB7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SGO1Q5FBB7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.72■■□□□ 1.39
SGO1Q5FBB7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.72■■□□□ 1.39
SGO1Q5FBB7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SGO1Q5FBB7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SGO1Q5FBB7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SGO1Q5FBB7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SGO1Q5FBB7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SGO1Q5FBB7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.71■■□□□ 1.39
SGO1Q5FBB7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.71■■□□□ 1.39
SGO1Q5FBB7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SGO1Q5FBB7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SGO1Q5FBB7 AC092803.2-201ENST00000564287 1899 ntBASIC23.7■■□□□ 1.39
SGO1Q5FBB7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms