Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CCSMST1Q4G0I0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCSMST1Q4G0I0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCSMST1Q4G0I0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCSMST1Q4G0I0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCSMST1Q4G0I0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.17■■□□□ 1.46
CCSMST1Q4G0I0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.17■■□□□ 1.46
CCSMST1Q4G0I0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCSMST1Q4G0I0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.16■■□□□ 1.46
CCSMST1Q4G0I0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CCSMST1Q4G0I0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCSMST1Q4G0I0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCSMST1Q4G0I0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.15■■□□□ 1.46
CCSMST1Q4G0I0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.15■■□□□ 1.46
CCSMST1Q4G0I0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCSMST1Q4G0I0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.15■■□□□ 1.46
CCSMST1Q4G0I0 AL359258.2-201ENST00000564063 1566 ntBASIC24.15■■□□□ 1.46
CCSMST1Q4G0I0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCSMST1Q4G0I0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
CCSMST1Q4G0I0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CCSMST1Q4G0I0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
CCSMST1Q4G0I0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CCSMST1Q4G0I0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CCSMST1Q4G0I0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCSMST1Q4G0I0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CCSMST1Q4G0I0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.12■■□□□ 1.45
CCSMST1Q4G0I0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCSMST1Q4G0I0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCSMST1Q4G0I0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CCSMST1Q4G0I0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCSMST1Q4G0I0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.1■■□□□ 1.45
CCSMST1Q4G0I0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCSMST1Q4G0I0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCSMST1Q4G0I0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.09■■□□□ 1.45
CCSMST1Q4G0I0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCSMST1Q4G0I0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.09■■□□□ 1.45
CCSMST1Q4G0I0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCSMST1Q4G0I0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.08■■□□□ 1.45
CCSMST1Q4G0I0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCSMST1Q4G0I0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.08■■□□□ 1.44
CCSMST1Q4G0I0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCSMST1Q4G0I0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
CCSMST1Q4G0I0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.07■■□□□ 1.44
CCSMST1Q4G0I0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CCSMST1Q4G0I0 AC060814.1-201ENST00000554326 538 ntBASIC24.07■■□□□ 1.44
CCSMST1Q4G0I0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.07■■□□□ 1.44
CCSMST1Q4G0I0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.07■■□□□ 1.44
CCSMST1Q4G0I0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.07■■□□□ 1.44
CCSMST1Q4G0I0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCSMST1Q4G0I0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.05■■□□□ 1.44
CCSMST1Q4G0I0 AP004609.3-201ENST00000610705 1884 ntBASIC24.04■■□□□ 1.44
CCSMST1Q4G0I0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCSMST1Q4G0I0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCSMST1Q4G0I0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 AC022413.1-201ENST00000624602 984 ntBASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCSMST1Q4G0I0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCSMST1Q4G0I0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCSMST1Q4G0I0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.01■■□□□ 1.43
CCSMST1Q4G0I0 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.01■■□□□ 1.43
CCSMST1Q4G0I0 AL157400.5-201ENST00000507624 621 ntBASIC24.01■■□□□ 1.43
CCSMST1Q4G0I0 AC126177.7-201ENST00000547904 679 ntBASIC24.01■■□□□ 1.43
CCSMST1Q4G0I0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCSMST1Q4G0I0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.01■■□□□ 1.43
CCSMST1Q4G0I0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCSMST1Q4G0I0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCSMST1Q4G0I0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
CCSMST1Q4G0I0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCSMST1Q4G0I0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCSMST1Q4G0I0 GPX1-201ENST00000419349 1106 ntBASIC23.99■■□□□ 1.43
CCSMST1Q4G0I0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.99■■□□□ 1.43
CCSMST1Q4G0I0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCSMST1Q4G0I0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCSMST1Q4G0I0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCSMST1Q4G0I0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CCSMST1Q4G0I0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCSMST1Q4G0I0 AL359504.2-201ENST00000605506 1601 ntBASIC23.98■■□□□ 1.43
CCSMST1Q4G0I0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCSMST1Q4G0I0 AC142472.1-201ENST00000612013 1741 ntBASIC23.98■■□□□ 1.43
CCSMST1Q4G0I0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.98■■□□□ 1.43
CCSMST1Q4G0I0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCSMST1Q4G0I0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms