Protein–RNA interactions for Protein: Q3KR37

GRAMD1B, GRAM domain-containing protein 1B, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1BQ3KR37 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
GRAMD1BQ3KR37 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
GRAMD1BQ3KR37 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GRAMD1BQ3KR37 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRAMD1BQ3KR37 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRAMD1BQ3KR37 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRAMD1BQ3KR37 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GRAMD1BQ3KR37 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRAMD1BQ3KR37 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.76■■□□□ 1.39
GRAMD1BQ3KR37 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GRAMD1BQ3KR37 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
GRAMD1BQ3KR37 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GRAMD1BQ3KR37 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GRAMD1BQ3KR37 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GRAMD1BQ3KR37 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GRAMD1BQ3KR37 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.74■■□□□ 1.39
GRAMD1BQ3KR37 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GRAMD1BQ3KR37 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GRAMD1BQ3KR37 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GRAMD1BQ3KR37 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GRAMD1BQ3KR37 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
GRAMD1BQ3KR37 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GRAMD1BQ3KR37 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.73■■□□□ 1.39
GRAMD1BQ3KR37 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GRAMD1BQ3KR37 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
GRAMD1BQ3KR37 AC021231.2-201ENST00000594613 730 ntBASIC23.72■■□□□ 1.39
GRAMD1BQ3KR37 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
GRAMD1BQ3KR37 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
GRAMD1BQ3KR37 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
GRAMD1BQ3KR37 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
GRAMD1BQ3KR37 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.71■■□□□ 1.39
GRAMD1BQ3KR37 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GRAMD1BQ3KR37 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.71■■□□□ 1.39
GRAMD1BQ3KR37 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
GRAMD1BQ3KR37 DUX4L29-201ENST00000425409 679 ntBASIC23.71■■□□□ 1.39
GRAMD1BQ3KR37 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GRAMD1BQ3KR37 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
GRAMD1BQ3KR37 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.7■■□□□ 1.38
GRAMD1BQ3KR37 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.7■■□□□ 1.38
GRAMD1BQ3KR37 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
GRAMD1BQ3KR37 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GRAMD1BQ3KR37 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
GRAMD1BQ3KR37 LINC00273-201ENST00000539813 1452 ntBASIC23.69■■□□□ 1.38
GRAMD1BQ3KR37 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
GRAMD1BQ3KR37 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
GRAMD1BQ3KR37 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.69■■□□□ 1.38
GRAMD1BQ3KR37 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
GRAMD1BQ3KR37 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GRAMD1BQ3KR37 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GRAMD1BQ3KR37 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.68■■□□□ 1.38
GRAMD1BQ3KR37 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
GRAMD1BQ3KR37 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.68■■□□□ 1.38
GRAMD1BQ3KR37 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GRAMD1BQ3KR37 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GRAMD1BQ3KR37 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
GRAMD1BQ3KR37 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
GRAMD1BQ3KR37 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GRAMD1BQ3KR37 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
GRAMD1BQ3KR37 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.67■■□□□ 1.38
GRAMD1BQ3KR37 AC135983.2-203ENST00000454486 1613 ntBASIC23.66■■□□□ 1.38
GRAMD1BQ3KR37 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.66■■□□□ 1.38
GRAMD1BQ3KR37 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.66■■□□□ 1.38
GRAMD1BQ3KR37 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GRAMD1BQ3KR37 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.66■■□□□ 1.38
GRAMD1BQ3KR37 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GRAMD1BQ3KR37 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GRAMD1BQ3KR37 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
GRAMD1BQ3KR37 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
GRAMD1BQ3KR37 WHAMMP2-203ENST00000563942 1603 ntBASIC23.64■■□□□ 1.38
GRAMD1BQ3KR37 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
GRAMD1BQ3KR37 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.64■■□□□ 1.37
GRAMD1BQ3KR37 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.64■■□□□ 1.37
GRAMD1BQ3KR37 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.64■■□□□ 1.37
GRAMD1BQ3KR37 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
GRAMD1BQ3KR37 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
GRAMD1BQ3KR37 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.64■■□□□ 1.37
GRAMD1BQ3KR37 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
GRAMD1BQ3KR37 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.63■■□□□ 1.37
GRAMD1BQ3KR37 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
GRAMD1BQ3KR37 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
GRAMD1BQ3KR37 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
GRAMD1BQ3KR37 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
GRAMD1BQ3KR37 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
GRAMD1BQ3KR37 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
GRAMD1BQ3KR37 AC100797.4-201ENST00000631653 1827 ntBASIC23.62■■□□□ 1.37
GRAMD1BQ3KR37 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
GRAMD1BQ3KR37 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
GRAMD1BQ3KR37 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
GRAMD1BQ3KR37 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.62■■□□□ 1.37
GRAMD1BQ3KR37 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.62■■□□□ 1.37
GRAMD1BQ3KR37 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
GRAMD1BQ3KR37 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms