Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.61■■□□□ 1.21
CLDN20P56880 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CLDN20P56880 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN20P56880 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN20P56880 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN20P56880 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.6■■□□□ 1.21
CLDN20P56880 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN20P56880 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN20P56880 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN20P56880 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.58■■□□□ 1.21
CLDN20P56880 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CLDN20P56880 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN20P56880 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
CLDN20P56880 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN20P56880 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN20P56880 AC018358.1-201ENST00000631079 1402 ntBASIC22.57■■□□□ 1.2
CLDN20P56880 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CLDN20P56880 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN20P56880 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN20P56880 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN20P56880 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN20P56880 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN20P56880 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN20P56880 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.55■■□□□ 1.2
CLDN20P56880 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN20P56880 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN20P56880 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.54■■□□□ 1.2
CLDN20P56880 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CLDN20P56880 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN20P56880 HSD17B1P1-201ENST00000590052 955 ntBASIC22.54■■□□□ 1.2
CLDN20P56880 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CLDN20P56880 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN20P56880 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.54■■□□□ 1.2
CLDN20P56880 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN20P56880 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN20P56880 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN20P56880 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN20P56880 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.53■■□□□ 1.2
CLDN20P56880 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CLDN20P56880 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CLDN20P56880 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.53■■□□□ 1.2
CLDN20P56880 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN20P56880 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.52■■□□□ 1.2
CLDN20P56880 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.52■■□□□ 1.2
CLDN20P56880 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CLDN20P56880 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.52■■□□□ 1.2
CLDN20P56880 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CLDN20P56880 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.52■■□□□ 1.2
CLDN20P56880 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN20P56880 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN20P56880 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CLDN20P56880 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CLDN20P56880 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLDN20P56880 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLDN20P56880 GPX1-201ENST00000419349 1106 ntBASIC22.51■■□□□ 1.19
CLDN20P56880 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.5■■□□□ 1.19
CLDN20P56880 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.5■■□□□ 1.19
CLDN20P56880 AC022413.1-201ENST00000624602 984 ntBASIC22.5■■□□□ 1.19
CLDN20P56880 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CLDN20P56880 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLDN20P56880 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN20P56880 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.49■■□□□ 1.19
CLDN20P56880 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.49■■□□□ 1.19
CLDN20P56880 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN20P56880 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.49■■□□□ 1.19
CLDN20P56880 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN20P56880 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN20P56880 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN20P56880 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLDN20P56880 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.48■■□□□ 1.19
CLDN20P56880 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.48■■□□□ 1.19
CLDN20P56880 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.48■■□□□ 1.19
CLDN20P56880 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CLDN20P56880 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLDN20P56880 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CLDN20P56880 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLDN20P56880 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLDN20P56880 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLDN20P56880 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CLDN20P56880 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLDN20P56880 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN20P56880 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN20P56880 AC060814.1-201ENST00000554326 538 ntBASIC22.46■■□□□ 1.19
CLDN20P56880 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN20P56880 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN20P56880 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN20P56880 LINC01003-201ENST00000564834 1764 ntBASIC22.45■■□□□ 1.19
CLDN20P56880 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLDN20P56880 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLDN20P56880 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.45■■□□□ 1.18
CLDN20P56880 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLDN20P56880 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.45■■□□□ 1.18
CLDN20P56880 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLDN20P56880 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLDN20P56880 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.44■■□□□ 1.18
CLDN20P56880 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.44■■□□□ 1.18
CLDN20P56880 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLDN20P56880 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.44■■□□□ 1.18
CLDN20P56880 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.44■■□□□ 1.18
CLDN20P56880 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms