Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 COG7YGL005C 840 nt6.99□□□□□ -1.29
PUB1P32588 YGR066CYGR066C 879 nt6.99□□□□□ -1.29
PUB1P32588 TES1YJR019C 1050 nt6.99□□□□□ -1.29
PUB1P32588 YJR115WYJR115W 510 nt6.99□□□□□ -1.29
PUB1P32588 TPO1YLL028W 1761 nt6.98□□□□□ -1.29 RIP-Chip
PUB1P32588 RPN9YDR427W 1182 nt6.98□□□□□ -1.29
PUB1P32588 ERJ5YFR041C 888 nt6.98□□□□□ -1.29
PUB1P32588 YMR181CYMR181C 465 nt6.98□□□□□ -1.29 RIP-Chip
PUB1P32588 snR57snR57 88 nt6.97□□□□□ -1.29
PUB1P32588 YPT31YER031C 672 nt6.97□□□□□ -1.29
PUB1P32588 TVP38YKR088C 1014 nt6.97□□□□□ -1.29 RIP-Chip
PUB1P32588 CDA2YLR308W 939 nt6.97□□□□□ -1.29
PUB1P32588 CTR3YLR411W 726 nt6.97□□□□□ -1.29
PUB1P32588 YMR007WYMR007W 381 nt6.97□□□□□ -1.29
PUB1P32588 YBR089WYBR089W 600 nt6.97□□□□□ -1.29
PUB1P32588 YBR138CYBR138C 1575 nt6.97□□□□□ -1.29
PUB1P32588 TGA1tA(UGC)A 73 nt6.96□□□□□ -1.3
PUB1P32588 tA(UGC)EtA(UGC)E 73 nt6.96□□□□□ -1.3
PUB1P32588 tA(UGC)GtA(UGC)G 73 nt6.96□□□□□ -1.3
PUB1P32588 tA(UGC)LtA(UGC)L 73 nt6.96□□□□□ -1.3
PUB1P32588 tA(UGC)OtA(UGC)O 73 nt6.96□□□□□ -1.3
PUB1P32588 BI2Q0110 1272 nt6.96□□□□□ -1.3 RIP-Chip
PUB1P32588 MSP1YGR028W 1089 nt6.96□□□□□ -1.3
PUB1P32588 BUD20YLR074C 501 nt6.96□□□□□ -1.3
PUB1P32588 TAF11YML015C 1041 nt6.96□□□□□ -1.3
PUB1P32588 HEM15YOR176W 1182 nt6.96□□□□□ -1.3 RIP-Chip
PUB1P32588 HTS1YPR033C 1641 nt6.96□□□□□ -1.3
PUB1P32588 PDC5YLR134W 1692 nt6.96□□□□□ -1.3
PUB1P32588 PEX28YHR150W 1740 nt6.96□□□□□ -1.3
PUB1P32588 LAS17YOR181W 1902 nt6.95□□□□□ -1.3
PUB1P32588 ERV29YGR284C 933 nt6.95□□□□□ -1.3 RIP-Chip
PUB1P32588 ATP12YJL180C 978 nt6.95□□□□□ -1.3
PUB1P32588 YKR075CYKR075C 924 nt6.95□□□□□ -1.3 RIP-Chip
PUB1P32588 YLR202CYLR202C 327 nt6.95□□□□□ -1.3
PUB1P32588 ATP10YLR393W 840 nt6.95□□□□□ -1.3
PUB1P32588 YIP3YNL044W 531 nt6.95□□□□□ -1.3 RIP-Chip
PUB1P32588 ARL3YPL051W 597 nt6.95□□□□□ -1.3
PUB1P32588 ESC2YDR363W 1371 nt6.95□□□□□ -1.3
PUB1P32588 YGR210CYGR210C 1236 nt6.94□□□□□ -1.3
PUB1P32588 PRE10YOR362C 867 nt6.94□□□□□ -1.3
PUB1P32588 LSP1YPL004C 1026 nt6.94□□□□□ -1.3 RIP-Chip
PUB1P32588 NMT1YLR195C 1368 nt6.94□□□□□ -1.3
PUB1P32588 RUP1YOR138C 2016 nt6.93□□□□□ -1.3
PUB1P32588 YDL241WYDL241W 372 nt6.93□□□□□ -1.3 RIP-Chip
PUB1P32588 RRT14YIL127C 621 nt6.93□□□□□ -1.3
PUB1P32588 YJR096WYJR096W 849 nt6.93□□□□□ -1.3
PUB1P32588 POP5YAL033W 522 nt6.93□□□□□ -1.3
PUB1P32588 SDS22YKL193C 1017 nt6.93□□□□□ -1.3 RIP-Chip
PUB1P32588 YLR407WYLR407W 687 nt6.93□□□□□ -1.3 RIP-Chip
PUB1P32588 IBD2YNL164C 1056 nt6.93□□□□□ -1.3
PUB1P32588 SLZ1YNL196C 897 nt6.93□□□□□ -1.3
PUB1P32588 YNL226WYNL226W 411 nt6.93□□□□□ -1.3
PUB1P32588 VHS2YIL135C 1311 nt6.93□□□□□ -1.3 RIP-Chip
PUB1P32588 IPI3YNL182C 1668 nt6.93□□□□□ -1.3
PUB1P32588 MRPL32YCR003W 552 nt6.92□□□□□ -1.3
PUB1P32588 PPH22YDL188C 1134 nt6.92□□□□□ -1.3 RIP-Chip
PUB1P32588 ARG3YJL088W 1017 nt6.92□□□□□ -1.3
PUB1P32588 YLR030WYLR030W 792 nt6.92□□□□□ -1.3
PUB1P32588 MTG1YMR097C 1104 nt6.92□□□□□ -1.3
PUB1P32588 TIM50YPL063W 1431 nt6.92□□□□□ -1.3
PUB1P32588 EHD3YDR036C 1503 nt6.91□□□□□ -1.3
PUB1P32588 YDL129WYDL129W 876 nt6.91□□□□□ -1.3 RIP-Chip
PUB1P32588 MRP1YDR347W 966 nt6.91□□□□□ -1.3
PUB1P32588 SUI2YJR007W 915 nt6.91□□□□□ -1.3
PUB1P32588 HAM1YJR069C 594 nt6.91□□□□□ -1.3
PUB1P32588 SNF7YLR025W 723 nt6.91□□□□□ -1.3
PUB1P32588 RCR1YBR005W 642 nt6.91□□□□□ -1.3 RIP-Chip
PUB1P32588 MNN9YPL050C 1188 nt6.91□□□□□ -1.3 RIP-Chip
PUB1P32588 YPL108WYPL108W 507 nt6.91□□□□□ -1.3
PUB1P32588 FCY1YPR062W 477 nt6.91□□□□□ -1.3 RIP-Chip
PUB1P32588 AOS1YPR180W 1044 nt6.91□□□□□ -1.3
PUB1P32588 snR56snR56 88 nt6.9□□□□□ -1.3
PUB1P32588 CCE1YKL011C 1062 nt6.9□□□□□ -1.3
PUB1P32588 RCF2YNR018W 675 nt6.9□□□□□ -1.3
PUB1P32588 ECM2YBR065C 1095 nt6.9□□□□□ -1.3
PUB1P32588 PTC4YBR125C 1182 nt6.9□□□□□ -1.3 RIP-Chip
PUB1P32588 LEO1YOR123C 1395 nt6.9□□□□□ -1.31
PUB1P32588 CDS1YBR029C 1374 nt6.9□□□□□ -1.31 RIP-Chip
PUB1P32588 DML1YMR211W 1428 nt6.9□□□□□ -1.31
PUB1P32588 YPL277CYPL277C 1464 nt6.9□□□□□ -1.31
PUB1P32588 TOP3YLR234W 1971 nt6.89□□□□□ -1.31
PUB1P32588 RAM1YDL090C 1296 nt6.89□□□□□ -1.31
PUB1P32588 YFR045WYFR045W 930 nt6.89□□□□□ -1.31
PUB1P32588 DCD1YHR144C 939 nt6.89□□□□□ -1.31
PUB1P32588 AIM23YJL131C 1071 nt6.89□□□□□ -1.31
PUB1P32588 MTR2YKL186C 555 nt6.89□□□□□ -1.31
PUB1P32588 TIF5YPR041W 1218 nt6.89□□□□□ -1.31
PUB1P32588 CMK1YFR014C 1341 nt6.89□□□□□ -1.31 RIP-Chip
PUB1P32588 ARG7YMR062C 1326 nt6.89□□□□□ -1.31
PUB1P32588 ERR3YMR323W 1314 nt6.89□□□□□ -1.31
PUB1P32588 ERR1YOR393W 1314 nt6.89□□□□□ -1.31
PUB1P32588 ERR2YPL281C 1314 nt6.89□□□□□ -1.31
PUB1P32588 HEM14YER014W 1620 nt6.89□□□□□ -1.31
PUB1P32588 MAS1YLR163C 1389 nt6.88□□□□□ -1.31
PUB1P32588 NBP2YDR162C 711 nt6.88□□□□□ -1.31
PUB1P32588 YMR253CYMR253C 1245 nt6.88□□□□□ -1.31 RIP-Chip
PUB1P32588 ATG19YOL082W 1248 nt6.88□□□□□ -1.31 RIP-Chip
PUB1P32588 YAP6YDR259C 1152 nt6.87□□□□□ -1.31
PUB1P32588 GNA1YFL017C 480 nt6.87□□□□□ -1.31
PUB1P32588 PMU1YKL128C 888 nt6.87□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 56.2 ms