Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CD40P25942 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD40P25942 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CD40P25942 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD40P25942 WHAMMP3-201ENST00000611636 1609 ntBASIC21.44■■□□□ 1.02
CD40P25942 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CD40P25942 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CD40P25942 AC025884.2-201ENST00000553429 711 ntBASIC21.44■■□□□ 1.02
CD40P25942 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD40P25942 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD40P25942 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CD40P25942 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD40P25942 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD40P25942 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.42■■□□□ 1.02
CD40P25942 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CD40P25942 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CD40P25942 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD40P25942 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.41■■□□□ 1.02
CD40P25942 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.41■■□□□ 1.02
CD40P25942 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD40P25942 AC012354.3-201ENST00000623734 483 ntBASIC21.41■■□□□ 1.02
CD40P25942 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD40P25942 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.4■■□□□ 1.02
CD40P25942 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD40P25942 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CD40P25942 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CD40P25942 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CD40P25942 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CD40P25942 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.39■■□□□ 1.01
CD40P25942 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CD40P25942 LINC01003-201ENST00000564834 1764 ntBASIC21.38■■□□□ 1.01
CD40P25942 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CD40P25942 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.38■■□□□ 1.01
CD40P25942 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CD40P25942 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CD40P25942 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.38■■□□□ 1.01
CD40P25942 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CD40P25942 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CD40P25942 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.37■■□□□ 1.01
CD40P25942 KRT18P60-201ENST00000312876 1297 ntBASIC21.37■■□□□ 1.01
CD40P25942 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CD40P25942 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CD40P25942 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.37■■□□□ 1.01
CD40P25942 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.37■■□□□ 1.01
CD40P25942 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CD40P25942 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CD40P25942 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.36■■□□□ 1.01
CD40P25942 RP9P-202ENST00000450133 1212 ntBASIC21.36■■□□□ 1.01
CD40P25942 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.36■■□□□ 1.01
CD40P25942 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CD40P25942 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CD40P25942 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CD40P25942 MIR3960-201ENST00000583311 91 ntBASIC21.35■■□□□ 1.01
CD40P25942 AC133552.2-201ENST00000619106 1032 ntBASIC21.35■■□□□ 1.01
CD40P25942 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CD40P25942 AL359504.2-201ENST00000605506 1601 ntBASIC21.35■■□□□ 1.01
CD40P25942 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.35■■□□□ 1.01
CD40P25942 AC009831.1-201ENST00000580420 1582 ntBASIC21.35■■□□□ 1.01
CD40P25942 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CD40P25942 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.34■■□□□ 1.01
CD40P25942 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CD40P25942 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CD40P25942 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD40P25942 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD40P25942 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CD40P25942 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD40P25942 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD40P25942 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD40P25942 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD40P25942 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CD40P25942 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CD40P25942 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CD40P25942 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CD40P25942 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.33■■□□□ 1.01
CD40P25942 AC026202.3-201ENST00000600805 1127 ntBASIC21.33■■□□□ 1.01
CD40P25942 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.33■■□□□ 1
CD40P25942 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD40P25942 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CD40P25942 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.32■■□□□ 1
CD40P25942 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD40P25942 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CD40P25942 AC093536.1-201ENST00000569153 554 ntBASIC21.32■■□□□ 1
CD40P25942 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.32■■□□□ 1
CD40P25942 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.32■■□□□ 1
CD40P25942 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD40P25942 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CD40P25942 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.31■■□□□ 1
CD40P25942 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD40P25942 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.31■■□□□ 1
CD40P25942 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD40P25942 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD40P25942 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CD40P25942 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD40P25942 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.3■■□□□ 1
CD40P25942 AL592293.1-201ENST00000502889 1188 ntBASIC21.3■■□□□ 1
CD40P25942 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD40P25942 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD40P25942 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD40P25942 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD40P25942 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 299.3 ms