Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 NUP57YGR119C 1626 nt5.97□□□□□ -1.45
CDC39P25655 YDR387CYDR387C 1668 nt5.97□□□□□ -1.45
CDC39P25655 IRC5YFR038W 2562 nt5.97□□□□□ -1.45
CDC39P25655 YAL045CYAL045C 309 nt5.97□□□□□ -1.45
CDC39P25655 LOT6YLR011W 576 nt5.97□□□□□ -1.45
CDC39P25655 DML1YMR211W 1428 nt5.97□□□□□ -1.45
CDC39P25655 GCG1YER163C 699 nt5.96□□□□□ -1.45
CDC39P25655 REC107YJR021C 945 nt5.96□□□□□ -1.45
CDC39P25655 YOL099CYOL099C 492 nt5.96□□□□□ -1.45
CDC39P25655 ADH5YBR145W 1056 nt5.96□□□□□ -1.45
CDC39P25655 YDR187CYDR187C 519 nt5.96□□□□□ -1.46
CDC39P25655 YKL018C-AYKL018C-A 300 nt5.96□□□□□ -1.46
CDC39P25655 PAB1YER165W 1734 nt5.96□□□□□ -1.46
CDC39P25655 QRI5YLR204W 336 nt5.95□□□□□ -1.46
CDC39P25655 YNR005CYNR005C 405 nt5.95□□□□□ -1.46
CDC39P25655 SMX3YPR182W 261 nt5.95□□□□□ -1.46
CDC39P25655 POB3YML069W 1659 nt5.94□□□□□ -1.46
CDC39P25655 YDL144CYDL144C 1071 nt5.93□□□□□ -1.46
CDC39P25655 YPQ2YDR352W 954 nt5.93□□□□□ -1.46
CDC39P25655 OSW2YLR054C 2175 nt5.93□□□□□ -1.46
CDC39P25655 YLL058WYLL058W 1728 nt5.92□□□□□ -1.46
CDC39P25655 YMR253CYMR253C 1245 nt5.92□□□□□ -1.46
CDC39P25655 ARC35YNR035C 1029 nt5.92□□□□□ -1.46
CDC39P25655 ILV6YCL009C 930 nt5.92□□□□□ -1.46
CDC39P25655 BRN1YBL097W 2265 nt5.92□□□□□ -1.46
CDC39P25655 TDP1YBR223C 1635 nt5.92□□□□□ -1.46
CDC39P25655 AQR1YNL065W 1761 nt5.92□□□□□ -1.46
CDC39P25655 CEM1YER061C 1329 nt5.91□□□□□ -1.46
CDC39P25655 MRPL28YDR462W 444 nt5.91□□□□□ -1.46
CDC39P25655 YHR213W-BYHR213W-B 300 nt5.91□□□□□ -1.46
CDC39P25655 YAR064WYAR064W 300 nt5.91□□□□□ -1.46
CDC39P25655 SPG5YMR191W 1122 nt5.91□□□□□ -1.46
CDC39P25655 TAE1YBR261C 699 nt5.91□□□□□ -1.46
CDC39P25655 MSC3YLR219W 2187 nt5.91□□□□□ -1.46
CDC39P25655 RDN5-2RDN5-2 119 nt5.9□□□□□ -1.46
CDC39P25655 RDN5-3RDN5-3 119 nt5.9□□□□□ -1.46
CDC39P25655 RDN5-4RDN5-4 119 nt5.9□□□□□ -1.46
CDC39P25655 RDN5-5RDN5-5 119 nt5.9□□□□□ -1.46
CDC39P25655 YOL046CYOL046C 675 nt5.9□□□□□ -1.46
CDC39P25655 YOR389WYOR389W 1875 nt5.9□□□□□ -1.46
CDC39P25655 YOR200WYOR200W 399 nt5.9□□□□□ -1.47
CDC39P25655 APE4YHR113W 1473 nt5.9□□□□□ -1.47
CDC39P25655 HED1YDR014W-A 489 nt5.89□□□□□ -1.47
CDC39P25655 PAC10YGR078C 600 nt5.89□□□□□ -1.47
CDC39P25655 YKL102CYKL102C 306 nt5.89□□□□□ -1.47
CDC39P25655 PHO85YPL031C 918 nt5.89□□□□□ -1.47
CDC39P25655 CDC1YDR182W 1476 nt5.89□□□□□ -1.47
CDC39P25655 YGL102CYGL102C 429 nt5.89□□□□□ -1.47
CDC39P25655 DRE2YKR071C 1047 nt5.89□□□□□ -1.47
CDC39P25655 YLR361C-AYLR361C-A 297 nt5.89□□□□□ -1.47
CDC39P25655 ECM10YEL030W 1935 nt5.89□□□□□ -1.47
CDC39P25655 PRI1YIR008C 1230 nt5.88□□□□□ -1.47
CDC39P25655 SLA2YNL243W 2907 nt5.88□□□□□ -1.47
CDC39P25655 PPS1YBR276C 2424 nt5.88□□□□□ -1.47
CDC39P25655 ERS1YCR075C 783 nt5.87□□□□□ -1.47
CDC39P25655 YML018CYML018C 1182 nt5.87□□□□□ -1.47
CDC39P25655 SNT309YPR101W 528 nt5.87□□□□□ -1.47
CDC39P25655 YPR127WYPR127W 1038 nt5.87□□□□□ -1.47
CDC39P25655 PPH21YDL134C 1110 nt5.86□□□□□ -1.47
CDC39P25655 URH1YDR400W 1023 nt5.86□□□□□ -1.47
CDC39P25655 FCP1YMR277W 2199 nt5.86□□□□□ -1.47
CDC39P25655 YGR068W-AYGR068W-A 96 nt5.86□□□□□ -1.47
CDC39P25655 HBN1YCL026C-B 582 nt5.86□□□□□ -1.47
CDC39P25655 AMN1YBR158W 1650 nt5.85□□□□□ -1.47
CDC39P25655 MRPL10YNL284C 969 nt5.85□□□□□ -1.47
CDC39P25655 DLD1YDL174C 1764 nt5.85□□□□□ -1.47
CDC39P25655 ZWF1YNL241C 1518 nt5.84□□□□□ -1.47
CDC39P25655 CBR1YIL043C 855 nt5.84□□□□□ -1.47
CDC39P25655 YOR012WYOR012W 414 nt5.84□□□□□ -1.47
CDC39P25655 NUP49YGL172W 1419 nt5.84□□□□□ -1.47
CDC39P25655 IRC7YFR055W 1023 nt5.84□□□□□ -1.47
CDC39P25655 YSC83YHR017W 1158 nt5.84□□□□□ -1.47
CDC39P25655 YKL077WYKL077W 1179 nt5.84□□□□□ -1.47
CDC39P25655 YNL092WYNL092W 1203 nt5.84□□□□□ -1.47
CDC39P25655 NDE1YMR145C 1683 nt5.84□□□□□ -1.48
CDC39P25655 TAF9YMR236W 474 nt5.83□□□□□ -1.48
CDC39P25655 EFM1YHL039W 1758 nt5.83□□□□□ -1.48
CDC39P25655 PTC7YHR076W 1032 nt5.83□□□□□ -1.48
CDC39P25655 YKR045CYKR045C 552 nt5.83□□□□□ -1.48
CDC39P25655 GCD11YER025W 1584 nt5.82□□□□□ -1.48
CDC39P25655 YHL018WYHL018W 363 nt5.81□□□□□ -1.48
CDC39P25655 ICP55YER078C 1536 nt5.8□□□□□ -1.48
CDC39P25655 YMR034CYMR034C 1305 nt5.8□□□□□ -1.48
CDC39P25655 SEC62YPL094C 825 nt5.8□□□□□ -1.48
CDC39P25655 MSG5YNL053W 1470 nt5.8□□□□□ -1.48
CDC39P25655 GNP1YDR508C 1992 nt5.79□□□□□ -1.48
CDC39P25655 VBA5YKR105C 1749 nt5.79□□□□□ -1.48
CDC39P25655 TUF1YOR187W 1314 nt5.79□□□□□ -1.48
CDC39P25655 MRPL23YOR150W 492 nt5.79□□□□□ -1.48
CDC39P25655 MAM3YOL060C 2121 nt5.79□□□□□ -1.48
CDC39P25655 HHY1YEL059W 309 nt5.78□□□□□ -1.48
CDC39P25655 HEM2YGL040C 1029 nt5.78□□□□□ -1.48
CDC39P25655 COQ1YBR003W 1422 nt5.78□□□□□ -1.48
CDC39P25655 tG(GCC)BtG(GCC)B 71 nt5.78□□□□□ -1.48
CDC39P25655 SUF16tG(GCC)C 71 nt5.78□□□□□ -1.48
CDC39P25655 tG(GCC)D1tG(GCC)D1 71 nt5.78□□□□□ -1.48
CDC39P25655 tG(GCC)D2tG(GCC)D2 71 nt5.78□□□□□ -1.48
CDC39P25655 tG(GCC)EtG(GCC)E 71 nt5.78□□□□□ -1.48
CDC39P25655 SUF20tG(GCC)F1 71 nt5.78□□□□□ -1.48
CDC39P25655 tG(GCC)F2tG(GCC)F2 71 nt5.78□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 9.9 ms