Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.93■□□□□ 0.94
HIST1H1DP16402 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H1DP16402 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HIST1H1DP16402 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.92■□□□□ 0.94
HIST1H1DP16402 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H1DP16402 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H1DP16402 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H1DP16402 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H1DP16402 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H1DP16402 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.91■□□□□ 0.94
HIST1H1DP16402 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H1DP16402 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
HIST1H1DP16402 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1DP16402 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HIST1H1DP16402 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1DP16402 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1DP16402 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1DP16402 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1DP16402 AC110285.7-201ENST00000624417 1536 ntBASIC20.89■□□□□ 0.94
HIST1H1DP16402 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.89■□□□□ 0.93
HIST1H1DP16402 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.89■□□□□ 0.93
HIST1H1DP16402 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.89■□□□□ 0.93
HIST1H1DP16402 WHAMMP3-201ENST00000611636 1609 ntBASIC20.89■□□□□ 0.93
HIST1H1DP16402 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1DP16402 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1DP16402 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.88■□□□□ 0.93
HIST1H1DP16402 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
HIST1H1DP16402 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1DP16402 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.87■□□□□ 0.93
HIST1H1DP16402 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H1DP16402 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.87■□□□□ 0.93
HIST1H1DP16402 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.86■□□□□ 0.93
HIST1H1DP16402 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H1DP16402 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H1DP16402 MIR3665-201ENST00000578708 105 ntBASIC20.86■□□□□ 0.93
HIST1H1DP16402 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HIST1H1DP16402 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HIST1H1DP16402 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HIST1H1DP16402 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H1DP16402 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.86■□□□□ 0.93
HIST1H1DP16402 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H1DP16402 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H1DP16402 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.85■□□□□ 0.93
HIST1H1DP16402 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.85■□□□□ 0.93
HIST1H1DP16402 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H1DP16402 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H1DP16402 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1DP16402 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.84■□□□□ 0.93
HIST1H1DP16402 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1DP16402 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1DP16402 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1DP16402 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H1DP16402 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H1DP16402 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H1DP16402 AC093323.1-202ENST00000635031 2045 ntBASIC20.83■□□□□ 0.92
HIST1H1DP16402 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1DP16402 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HIST1H1DP16402 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
HIST1H1DP16402 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1DP16402 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.82■□□□□ 0.92
HIST1H1DP16402 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1DP16402 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1DP16402 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.82■□□□□ 0.92
HIST1H1DP16402 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1DP16402 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1DP16402 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1DP16402 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1DP16402 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.82■□□□□ 0.92
HIST1H1DP16402 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H1DP16402 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H1DP16402 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.81■□□□□ 0.92
HIST1H1DP16402 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HIST1H1DP16402 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
HIST1H1DP16402 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H1DP16402 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H1DP16402 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HIST1H1DP16402 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HIST1H1DP16402 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H1DP16402 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H1DP16402 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H1DP16402 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H1DP16402 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
HIST1H1DP16402 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HIST1H1DP16402 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.79■□□□□ 0.92
HIST1H1DP16402 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H1DP16402 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H1DP16402 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H1DP16402 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HIST1H1DP16402 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.78■□□□□ 0.92
HIST1H1DP16402 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H1DP16402 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H1DP16402 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HIST1H1DP16402 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H1DP16402 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HIST1H1DP16402 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
HIST1H1DP16402 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H1DP16402 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.77■□□□□ 0.92
HIST1H1DP16402 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H1DP16402 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H1DP16402 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms