Protein–RNA interactions for Protein: P0C860

MSL3P1, Putative male-specific lethal-3 protein-like 2, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1P0C860 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MSL3P1P0C860 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.72■■□□□ 1.39
MSL3P1P0C860 AC007029.1-201ENST00000604183 313 ntBASIC23.72■■□□□ 1.39
MSL3P1P0C860 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MSL3P1P0C860 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MSL3P1P0C860 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MSL3P1P0C860 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.71■■□□□ 1.39
MSL3P1P0C860 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.71■■□□□ 1.39
MSL3P1P0C860 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
MSL3P1P0C860 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
MSL3P1P0C860 AC025884.2-201ENST00000553429 711 ntBASIC23.71■■□□□ 1.39
MSL3P1P0C860 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.7■■□□□ 1.39
MSL3P1P0C860 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MSL3P1P0C860 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MSL3P1P0C860 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.7■■□□□ 1.38
MSL3P1P0C860 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.7■■□□□ 1.38
MSL3P1P0C860 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
MSL3P1P0C860 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.7■■□□□ 1.38
MSL3P1P0C860 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSL3P1P0C860 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
MSL3P1P0C860 SMPD5-203ENST00000639008 1464 ntBASIC23.69■■□□□ 1.38
MSL3P1P0C860 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.69■■□□□ 1.38
MSL3P1P0C860 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.69■■□□□ 1.38
MSL3P1P0C860 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.69■■□□□ 1.38
MSL3P1P0C860 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
MSL3P1P0C860 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
MSL3P1P0C860 DRD5P2-201ENST00000421395 2012 ntBASIC23.69■■□□□ 1.38
MSL3P1P0C860 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.69■■□□□ 1.38
MSL3P1P0C860 U85056.1-201ENST00000616429 682 ntBASIC23.68■■□□□ 1.38
MSL3P1P0C860 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
MSL3P1P0C860 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MSL3P1P0C860 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MSL3P1P0C860 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MSL3P1P0C860 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MSL3P1P0C860 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MSL3P1P0C860 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
MSL3P1P0C860 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MSL3P1P0C860 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
MSL3P1P0C860 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.66■■□□□ 1.38
MSL3P1P0C860 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MSL3P1P0C860 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
MSL3P1P0C860 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
MSL3P1P0C860 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
MSL3P1P0C860 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.65■■□□□ 1.38
MSL3P1P0C860 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.65■■□□□ 1.38
MSL3P1P0C860 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSL3P1P0C860 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSL3P1P0C860 AC142086.6-201ENST00000621154 1765 ntBASIC23.65■■□□□ 1.38
MSL3P1P0C860 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
MSL3P1P0C860 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.64■■□□□ 1.38
MSL3P1P0C860 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
MSL3P1P0C860 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
MSL3P1P0C860 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
MSL3P1P0C860 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.64■■□□□ 1.37
MSL3P1P0C860 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSL3P1P0C860 WHAMMP3-201ENST00000611636 1609 ntBASIC23.63■■□□□ 1.37
MSL3P1P0C860 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSL3P1P0C860 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSL3P1P0C860 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.63■■□□□ 1.37
MSL3P1P0C860 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.63■■□□□ 1.37
MSL3P1P0C860 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
MSL3P1P0C860 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
MSL3P1P0C860 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MSL3P1P0C860 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
MSL3P1P0C860 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
MSL3P1P0C860 AC012354.3-201ENST00000623734 483 ntBASIC23.62■■□□□ 1.37
MSL3P1P0C860 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.61■■□□□ 1.37
MSL3P1P0C860 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MSL3P1P0C860 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.61■■□□□ 1.37
MSL3P1P0C860 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.61■■□□□ 1.37
MSL3P1P0C860 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MSL3P1P0C860 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
MSL3P1P0C860 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MSL3P1P0C860 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
MSL3P1P0C860 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
MSL3P1P0C860 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MSL3P1P0C860 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MSL3P1P0C860 MIR3960-201ENST00000583311 91 ntBASIC23.59■■□□□ 1.37
MSL3P1P0C860 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MSL3P1P0C860 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MSL3P1P0C860 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MSL3P1P0C860 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
MSL3P1P0C860 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MSL3P1P0C860 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
MSL3P1P0C860 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
MSL3P1P0C860 KRT18P60-201ENST00000312876 1297 ntBASIC23.58■■□□□ 1.37
MSL3P1P0C860 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
MSL3P1P0C860 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
MSL3P1P0C860 RP9P-202ENST00000450133 1212 ntBASIC23.58■■□□□ 1.37
MSL3P1P0C860 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MSL3P1P0C860 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MSL3P1P0C860 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
MSL3P1P0C860 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MSL3P1P0C860 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MSL3P1P0C860 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.56■■□□□ 1.36
MSL3P1P0C860 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
MSL3P1P0C860 LINC01003-201ENST00000564834 1764 ntBASIC23.55■■□□□ 1.36
MSL3P1P0C860 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
MSL3P1P0C860 AC026202.3-201ENST00000600805 1127 ntBASIC23.55■■□□□ 1.36
MSL3P1P0C860 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms