Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.04■■□□□ 1.12
MRPL3P09001 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.04■■□□□ 1.12
MRPL3P09001 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.04■■□□□ 1.12
MRPL3P09001 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MRPL3P09001 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
MRPL3P09001 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MRPL3P09001 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MRPL3P09001 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
MRPL3P09001 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
MRPL3P09001 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MRPL3P09001 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MRPL3P09001 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRPL3P09001 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRPL3P09001 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRPL3P09001 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.02■■□□□ 1.12
MRPL3P09001 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.02■■□□□ 1.12
MRPL3P09001 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRPL3P09001 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRPL3P09001 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRPL3P09001 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.01■■□□□ 1.11
MRPL3P09001 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.01■■□□□ 1.11
MRPL3P09001 AC142472.1-201ENST00000612013 1741 ntBASIC22■■□□□ 1.11
MRPL3P09001 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MRPL3P09001 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22■■□□□ 1.11
MRPL3P09001 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MRPL3P09001 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
MRPL3P09001 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
MRPL3P09001 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22■■□□□ 1.11
MRPL3P09001 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MRPL3P09001 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22■■□□□ 1.11
MRPL3P09001 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MRPL3P09001 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MRPL3P09001 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
MRPL3P09001 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.99■■□□□ 1.11
MRPL3P09001 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MRPL3P09001 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MRPL3P09001 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MRPL3P09001 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MRPL3P09001 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.99■■□□□ 1.11
MRPL3P09001 AL162393.1-201ENST00000437852 946 ntBASIC21.99■■□□□ 1.11
MRPL3P09001 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.99■■□□□ 1.11
MRPL3P09001 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MRPL3P09001 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MRPL3P09001 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
MRPL3P09001 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRPL3P09001 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.98■■□□□ 1.11
MRPL3P09001 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRPL3P09001 WHAMMP3-201ENST00000611636 1609 ntBASIC21.98■■□□□ 1.11
MRPL3P09001 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MRPL3P09001 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
MRPL3P09001 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MRPL3P09001 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MRPL3P09001 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRPL3P09001 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
MRPL3P09001 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRPL3P09001 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MRPL3P09001 AC044849.2-201ENST00000606596 710 ntBASIC21.96■■□□□ 1.11
MRPL3P09001 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MRPL3P09001 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MRPL3P09001 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRPL3P09001 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
MRPL3P09001 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
MRPL3P09001 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MRPL3P09001 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MRPL3P09001 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
MRPL3P09001 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MRPL3P09001 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MRPL3P09001 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MRPL3P09001 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
MRPL3P09001 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRPL3P09001 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
MRPL3P09001 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MRPL3P09001 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
MRPL3P09001 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.94■■□□□ 1.1
MRPL3P09001 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MRPL3P09001 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRPL3P09001 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MRPL3P09001 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
MRPL3P09001 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MRPL3P09001 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.93■■□□□ 1.1
MRPL3P09001 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MRPL3P09001 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MRPL3P09001 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MRPL3P09001 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.92■■□□□ 1.1
MRPL3P09001 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
MRPL3P09001 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MRPL3P09001 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MRPL3P09001 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MRPL3P09001 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MRPL3P09001 AC021231.2-201ENST00000594613 730 ntBASIC21.91■■□□□ 1.1
MRPL3P09001 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MRPL3P09001 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MRPL3P09001 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MRPL3P09001 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.9■■□□□ 1.1
MRPL3P09001 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MRPL3P09001 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MRPL3P09001 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MRPL3P09001 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MRPL3P09001 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MRPL3P09001 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms