Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL135925.1-201ENST00000605920 1701 ntBASIC25.54■■□□□ 1.68
PDGFBP01127 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.54■■□□□ 1.68
PDGFBP01127 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
PDGFBP01127 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.53■■□□□ 1.68
PDGFBP01127 AC018755.3-202ENST00000596210 929 ntBASIC25.53■■□□□ 1.68
PDGFBP01127 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDGFBP01127 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDGFBP01127 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PDGFBP01127 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.52■■□□□ 1.68
PDGFBP01127 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDGFBP01127 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
PDGFBP01127 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDGFBP01127 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PDGFBP01127 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PDGFBP01127 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.51■■□□□ 1.67
PDGFBP01127 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PDGFBP01127 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.51■■□□□ 1.67
PDGFBP01127 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.51■■□□□ 1.67
PDGFBP01127 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PDGFBP01127 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.51■■□□□ 1.67
PDGFBP01127 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDGFBP01127 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDGFBP01127 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.5■■□□□ 1.67
PDGFBP01127 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.5■■□□□ 1.67
PDGFBP01127 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.5■■□□□ 1.67
PDGFBP01127 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDGFBP01127 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDGFBP01127 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDGFBP01127 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
PDGFBP01127 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDGFBP01127 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDGFBP01127 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
PDGFBP01127 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDGFBP01127 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDGFBP01127 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
PDGFBP01127 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDGFBP01127 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.46■■□□□ 1.67
PDGFBP01127 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.46■■□□□ 1.67
PDGFBP01127 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.45■■□□□ 1.66
PDGFBP01127 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.45■■□□□ 1.66
PDGFBP01127 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.45■■□□□ 1.66
PDGFBP01127 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.45■■□□□ 1.66
PDGFBP01127 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PDGFBP01127 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDGFBP01127 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.44■■□□□ 1.66
PDGFBP01127 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.44■■□□□ 1.66
PDGFBP01127 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.44■■□□□ 1.66
PDGFBP01127 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDGFBP01127 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.43■■□□□ 1.66
PDGFBP01127 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.43■■□□□ 1.66
PDGFBP01127 MIR3960-201ENST00000583311 91 ntBASIC25.43■■□□□ 1.66
PDGFBP01127 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDGFBP01127 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.43■■□□□ 1.66
PDGFBP01127 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDGFBP01127 MIR638-201ENST00000385237 100 ntBASIC25.42■■□□□ 1.66
PDGFBP01127 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.41■■□□□ 1.66
PDGFBP01127 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.41■■□□□ 1.66
PDGFBP01127 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PDGFBP01127 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PDGFBP01127 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.4■■□□□ 1.66
PDGFBP01127 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
PDGFBP01127 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.39■■□□□ 1.66
PDGFBP01127 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PDGFBP01127 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PDGFBP01127 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
PDGFBP01127 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDGFBP01127 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDGFBP01127 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PDGFBP01127 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
PDGFBP01127 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.36■■□□□ 1.65
PDGFBP01127 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDGFBP01127 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDGFBP01127 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDGFBP01127 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDGFBP01127 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.34■■□□□ 1.65
PDGFBP01127 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PDGFBP01127 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDGFBP01127 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDGFBP01127 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.33■■□□□ 1.65
PDGFBP01127 Z92544.1-202ENST00000571933 1220 ntBASIC25.32■■□□□ 1.64
PDGFBP01127 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDGFBP01127 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDGFBP01127 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.31■■□□□ 1.64
PDGFBP01127 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.31■■□□□ 1.64
PDGFBP01127 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDGFBP01127 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PDGFBP01127 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDGFBP01127 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
PDGFBP01127 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDGFBP01127 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDGFBP01127 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PDGFBP01127 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.29■■□□□ 1.64
PDGFBP01127 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDGFBP01127 AC100797.4-201ENST00000631653 1827 ntBASIC25.28■■□□□ 1.64
PDGFBP01127 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDGFBP01127 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.28■■□□□ 1.64
PDGFBP01127 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.28■■□□□ 1.64
PDGFBP01127 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDGFBP01127 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.28■■□□□ 1.64
PDGFBP01127 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms