Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TSPAN9O75954 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN9O75954 AL135925.1-201ENST00000605920 1701 ntBASIC20.89■□□□□ 0.93
TSPAN9O75954 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN9O75954 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN9O75954 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN9O75954 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TSPAN9O75954 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN9O75954 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.88■□□□□ 0.93
TSPAN9O75954 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.88■□□□□ 0.93
TSPAN9O75954 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN9O75954 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN9O75954 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.88■□□□□ 0.93
TSPAN9O75954 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN9O75954 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN9O75954 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN9O75954 AC016575.1-201ENST00000607026 382 ntBASIC20.87■□□□□ 0.93
TSPAN9O75954 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN9O75954 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN9O75954 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN9O75954 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN9O75954 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TSPAN9O75954 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.86■□□□□ 0.93
TSPAN9O75954 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TSPAN9O75954 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.86■□□□□ 0.93
TSPAN9O75954 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN9O75954 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN9O75954 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN9O75954 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.85■□□□□ 0.93
TSPAN9O75954 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
TSPAN9O75954 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TSPAN9O75954 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN9O75954 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.85■□□□□ 0.93
TSPAN9O75954 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN9O75954 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN9O75954 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN9O75954 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN9O75954 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN9O75954 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.84■□□□□ 0.93
TSPAN9O75954 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.84■□□□□ 0.93
TSPAN9O75954 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN9O75954 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TSPAN9O75954 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TSPAN9O75954 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TSPAN9O75954 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN9O75954 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN9O75954 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN9O75954 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
TSPAN9O75954 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.83■□□□□ 0.93
TSPAN9O75954 CR559946.2-201ENST00000623684 991 ntBASIC20.83■□□□□ 0.93
TSPAN9O75954 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TSPAN9O75954 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TSPAN9O75954 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TSPAN9O75954 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN9O75954 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.81■□□□□ 0.92
TSPAN9O75954 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN9O75954 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN9O75954 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN9O75954 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN9O75954 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN9O75954 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN9O75954 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN9O75954 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN9O75954 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN9O75954 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.79■□□□□ 0.92
TSPAN9O75954 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.79■□□□□ 0.92
TSPAN9O75954 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.79■□□□□ 0.92
TSPAN9O75954 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TSPAN9O75954 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.78■□□□□ 0.92
TSPAN9O75954 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN9O75954 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN9O75954 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN9O75954 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TSPAN9O75954 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN9O75954 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN9O75954 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN9O75954 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN9O75954 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSPAN9O75954 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.77■□□□□ 0.92
TSPAN9O75954 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TSPAN9O75954 DUX4L13-201ENST00000554103 1267 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 DUX4L15-201ENST00000611059 1267 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 DUX4L23-201ENST00000615195 1269 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 DUX4L24-201ENST00000617576 1269 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 DUX4L22-201ENST00000618238 1269 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 DUX4L20-201ENST00000619712 1269 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 DUX4L21-201ENST00000622058 1269 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 DUX4L10-201ENST00000622460 1267 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 DUX4L25-201ENST00000624915 1269 ntBASIC20.76■□□□□ 0.91
TSPAN9O75954 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.76■□□□□ 0.91
TSPAN9O75954 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSPAN9O75954 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms