Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGA12O60330 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.53■■□□□ 1.52
PCDHGA12O60330 AC026202.3-201ENST00000600805 1127 ntBASIC24.53■■□□□ 1.52
PCDHGA12O60330 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHGA12O60330 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGA12O60330 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHGA12O60330 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGA12O60330 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGA12O60330 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGA12O60330 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGA12O60330 AC025884.2-201ENST00000553429 711 ntBASIC24.52■■□□□ 1.52
PCDHGA12O60330 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
PCDHGA12O60330 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHGA12O60330 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
PCDHGA12O60330 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA12O60330 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PCDHGA12O60330 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA12O60330 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA12O60330 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGA12O60330 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PCDHGA12O60330 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHGA12O60330 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGA12O60330 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHGA12O60330 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHGA12O60330 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDHGA12O60330 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
PCDHGA12O60330 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGA12O60330 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGA12O60330 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHGA12O60330 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGA12O60330 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGA12O60330 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHGA12O60330 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PCDHGA12O60330 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGA12O60330 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHGA12O60330 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGA12O60330 AC100797.4-201ENST00000631653 1827 ntBASIC24.47■■□□□ 1.51
PCDHGA12O60330 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDHGA12O60330 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDHGA12O60330 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGA12O60330 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDHGA12O60330 AL035685.1-201ENST00000636663 812 ntBASIC24.47■■□□□ 1.51
PCDHGA12O60330 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGA12O60330 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGA12O60330 RP9P-202ENST00000450133 1212 ntBASIC24.46■■□□□ 1.51
PCDHGA12O60330 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA12O60330 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
PCDHGA12O60330 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGA12O60330 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHGA12O60330 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDHGA12O60330 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA12O60330 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDHGA12O60330 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.44■■□□□ 1.5
PCDHGA12O60330 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
PCDHGA12O60330 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
PCDHGA12O60330 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGA12O60330 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGA12O60330 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHGA12O60330 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGA12O60330 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PCDHGA12O60330 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGA12O60330 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGA12O60330 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGA12O60330 DUX4L9-201ENST00000449051 1259 ntBASIC24.42■■□□□ 1.5
PCDHGA12O60330 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDHGA12O60330 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGA12O60330 AL451085.2-201ENST00000605085 799 ntBASIC24.42■■□□□ 1.5
PCDHGA12O60330 AC074183.2-201ENST00000623112 922 ntBASIC24.42■■□□□ 1.5
PCDHGA12O60330 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
PCDHGA12O60330 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGA12O60330 AC093536.1-201ENST00000569153 554 ntBASIC24.41■■□□□ 1.5
PCDHGA12O60330 RAP2CP1-202ENST00000605179 643 ntBASIC24.41■■□□□ 1.5
PCDHGA12O60330 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHGA12O60330 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGA12O60330 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHGA12O60330 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGA12O60330 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHGA12O60330 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHGA12O60330 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGA12O60330 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGA12O60330 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDHGA12O60330 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHGA12O60330 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHGA12O60330 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHGA12O60330 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PCDHGA12O60330 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.38■■□□□ 1.49
PCDHGA12O60330 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDHGA12O60330 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGA12O60330 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGA12O60330 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGA12O60330 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.37■■□□□ 1.49
PCDHGA12O60330 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDHGA12O60330 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHGA12O60330 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGA12O60330 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
PCDHGA12O60330 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHGA12O60330 BHLHE23-202ENST00000612929 1109 ntBASIC24.36■■□□□ 1.49
PCDHGA12O60330 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGA12O60330 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHGA12O60330 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms