Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 AP004609.3-201ENST00000610705 1884 ntBASIC21.02■□□□□ 0.96
SSX5O60225 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSX5O60225 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SSX5O60225 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSX5O60225 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSX5O60225 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SSX5O60225 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSX5O60225 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21■□□□□ 0.95
SSX5O60225 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSX5O60225 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSX5O60225 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.99■□□□□ 0.95
SSX5O60225 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSX5O60225 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSX5O60225 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSX5O60225 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSX5O60225 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SSX5O60225 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.98■□□□□ 0.95
SSX5O60225 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSX5O60225 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSX5O60225 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSX5O60225 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX5O60225 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.97■□□□□ 0.95
SSX5O60225 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.97■□□□□ 0.95
SSX5O60225 MIR6090-201ENST00000622481 60 ntBASIC20.97■□□□□ 0.95
SSX5O60225 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSX5O60225 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSX5O60225 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSX5O60225 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.97■□□□□ 0.95
SSX5O60225 AC108673.1-201ENST00000510422 1159 ntBASIC20.96■□□□□ 0.95
SSX5O60225 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.96■□□□□ 0.95
SSX5O60225 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX5O60225 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX5O60225 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSX5O60225 AC005559.1-201ENST00000589661 871 ntBASIC20.95■□□□□ 0.94
SSX5O60225 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SSX5O60225 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSX5O60225 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SSX5O60225 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX5O60225 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX5O60225 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSX5O60225 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSX5O60225 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SSX5O60225 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX5O60225 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX5O60225 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX5O60225 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.93■□□□□ 0.94
SSX5O60225 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SSX5O60225 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSX5O60225 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.92■□□□□ 0.94
SSX5O60225 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX5O60225 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX5O60225 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSX5O60225 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX5O60225 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX5O60225 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SSX5O60225 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSX5O60225 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
SSX5O60225 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSX5O60225 AC093323.1-202ENST00000635031 2045 ntBASIC20.91■□□□□ 0.94
SSX5O60225 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX5O60225 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SSX5O60225 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.9■□□□□ 0.94
SSX5O60225 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX5O60225 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX5O60225 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX5O60225 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SSX5O60225 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SSX5O60225 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.89■□□□□ 0.93
SSX5O60225 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSX5O60225 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSX5O60225 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSX5O60225 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SSX5O60225 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.88■□□□□ 0.93
SSX5O60225 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.88■□□□□ 0.93
SSX5O60225 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.88■□□□□ 0.93
SSX5O60225 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX5O60225 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.87■□□□□ 0.93
SSX5O60225 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSX5O60225 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX5O60225 AC142472.1-201ENST00000612013 1741 ntBASIC20.87■□□□□ 0.93
SSX5O60225 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SSX5O60225 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX5O60225 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX5O60225 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.86■□□□□ 0.93
SSX5O60225 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.86■□□□□ 0.93
SSX5O60225 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.86■□□□□ 0.93
SSX5O60225 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SSX5O60225 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SSX5O60225 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX5O60225 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSX5O60225 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.85■□□□□ 0.93
SSX5O60225 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.85■□□□□ 0.93
SSX5O60225 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.85■□□□□ 0.93
SSX5O60225 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX5O60225 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSX5O60225 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSX5O60225 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.84■□□□□ 0.93
SSX5O60225 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSX5O60225 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.84■□□□□ 0.93
SSX5O60225 SUZ12P1-203ENST00000578195 985 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms