Protein–RNA interactions for Protein: O14966

RAB29, Ras-related protein Rab-7L1, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB29O14966 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAB29O14966 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB29O14966 AC008813.1-201ENST00000536597 885 ntBASIC20.28■□□□□ 0.84
RAB29O14966 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB29O14966 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB29O14966 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB29O14966 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAB29O14966 WHAMMP3-201ENST00000611636 1609 ntBASIC20.27■□□□□ 0.84
RAB29O14966 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB29O14966 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB29O14966 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB29O14966 ZNRF2P2-203ENST00000454624 420 ntBASIC20.27■□□□□ 0.84
RAB29O14966 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RAB29O14966 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAB29O14966 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB29O14966 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RAB29O14966 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB29O14966 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB29O14966 AP004609.3-201ENST00000610705 1884 ntBASIC20.24■□□□□ 0.83
RAB29O14966 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB29O14966 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RAB29O14966 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB29O14966 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB29O14966 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB29O14966 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB29O14966 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB29O14966 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB29O14966 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.22■□□□□ 0.83
RAB29O14966 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB29O14966 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RAB29O14966 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RAB29O14966 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB29O14966 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB29O14966 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RAB29O14966 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB29O14966 AC145676.1-201ENST00000514988 2004 ntBASIC20.21■□□□□ 0.83
RAB29O14966 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB29O14966 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB29O14966 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.21■□□□□ 0.83
RAB29O14966 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.21■□□□□ 0.83
RAB29O14966 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB29O14966 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB29O14966 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB29O14966 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB29O14966 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB29O14966 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB29O14966 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB29O14966 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB29O14966 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB29O14966 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB29O14966 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB29O14966 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB29O14966 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB29O14966 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB29O14966 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB29O14966 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB29O14966 AC135731.1-201ENST00000569415 2548 ntBASIC20.18■□□□□ 0.82
RAB29O14966 ABHD17AP4-201ENST00000411545 909 ntBASIC20.18■□□□□ 0.82
RAB29O14966 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB29O14966 AC142472.1-201ENST00000612013 1741 ntBASIC20.18■□□□□ 0.82
RAB29O14966 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB29O14966 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAB29O14966 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB29O14966 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB29O14966 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.17■□□□□ 0.82
RAB29O14966 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB29O14966 AC148477.6-201ENST00000623746 465 ntBASIC20.17■□□□□ 0.82
RAB29O14966 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB29O14966 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RAB29O14966 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
RAB29O14966 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB29O14966 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB29O14966 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB29O14966 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB29O14966 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAB29O14966 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB29O14966 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB29O14966 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB29O14966 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB29O14966 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB29O14966 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB29O14966 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB29O14966 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB29O14966 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB29O14966 MIR219A2-201ENST00000608502 1504 ntBASIC20.15■□□□□ 0.82
RAB29O14966 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB29O14966 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB29O14966 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB29O14966 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB29O14966 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB29O14966 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RAB29O14966 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB29O14966 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB29O14966 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB29O14966 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB29O14966 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB29O14966 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB29O14966 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB29O14966 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RAB29O14966 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 818.4 ms