Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DUX4L10-201ENST00000622460 1267 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 DUX4L25-201ENST00000624915 1269 ntBASIC19.7■□□□□ 0.74
CGB1A6NKQ9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CGB1A6NKQ9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CGB1A6NKQ9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.69■□□□□ 0.74
CGB1A6NKQ9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.68■□□□□ 0.74
CGB1A6NKQ9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CGB1A6NKQ9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CGB1A6NKQ9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CGB1A6NKQ9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CGB1A6NKQ9 DUX4L11-201ENST00000611504 1267 ntBASIC19.67■□□□□ 0.74
CGB1A6NKQ9 DUX4L12-201ENST00000614593 1267 ntBASIC19.67■□□□□ 0.74
CGB1A6NKQ9 DUX4L14-201ENST00000621227 1267 ntBASIC19.67■□□□□ 0.74
CGB1A6NKQ9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.67■□□□□ 0.74
CGB1A6NKQ9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CGB1A6NKQ9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.66■□□□□ 0.74
CGB1A6NKQ9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CGB1A6NKQ9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CGB1A6NKQ9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 AC142472.1-201ENST00000612013 1741 ntBASIC19.65■□□□□ 0.74
CGB1A6NKQ9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CGB1A6NKQ9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CGB1A6NKQ9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CGB1A6NKQ9 ZNRF2P2-203ENST00000454624 420 ntBASIC19.64■□□□□ 0.73
CGB1A6NKQ9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.64■□□□□ 0.73
CGB1A6NKQ9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.64■□□□□ 0.73
CGB1A6NKQ9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.64■□□□□ 0.73
CGB1A6NKQ9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.63■□□□□ 0.73
CGB1A6NKQ9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CGB1A6NKQ9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CGB1A6NKQ9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CGB1A6NKQ9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CGB1A6NKQ9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CGB1A6NKQ9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CGB1A6NKQ9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 AC145676.1-201ENST00000514988 2004 ntBASIC19.59■□□□□ 0.73
CGB1A6NKQ9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CGB1A6NKQ9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGB1A6NKQ9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CGB1A6NKQ9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CGB1A6NKQ9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.58■□□□□ 0.72
CGB1A6NKQ9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CGB1A6NKQ9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 MIR219A2-201ENST00000608502 1504 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 AC092803.2-201ENST00000564287 1899 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 HLA-V-202ENST00000446817 847 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 AC008813.1-201ENST00000536597 885 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 AC148477.6-201ENST00000623746 465 ntBASIC19.57■□□□□ 0.72
CGB1A6NKQ9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.57■□□□□ 0.72
CGB1A6NKQ9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CGB1A6NKQ9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CGB1A6NKQ9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms