Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRBV27A0A0K0K1C4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV27A0A0K0K1C4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV27A0A0K0K1C4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV27A0A0K0K1C4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV27A0A0K0K1C4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV27A0A0K0K1C4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV27A0A0K0K1C4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.46■□□□□ 0.39
TRBV27A0A0K0K1C4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV27A0A0K0K1C4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.45■□□□□ 0.38
TRBV27A0A0K0K1C4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV27A0A0K0K1C4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV27A0A0K0K1C4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 AC005559.1-201ENST00000589661 871 ntBASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRBV27A0A0K0K1C4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV27A0A0K0K1C4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV27A0A0K0K1C4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV27A0A0K0K1C4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRBV27A0A0K0K1C4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV27A0A0K0K1C4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV27A0A0K0K1C4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV27A0A0K0K1C4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV27A0A0K0K1C4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV27A0A0K0K1C4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV27A0A0K0K1C4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRBV27A0A0K0K1C4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV27A0A0K0K1C4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV27A0A0K0K1C4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV27A0A0K0K1C4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV27A0A0K0K1C4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBV27A0A0K0K1C4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV27A0A0K0K1C4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV27A0A0K0K1C4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV27A0A0K0K1C4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV27A0A0K0K1C4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV27A0A0K0K1C4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRBV27A0A0K0K1C4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV27A0A0K0K1C4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV27A0A0K0K1C4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV27A0A0K0K1C4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV27A0A0K0K1C4 MIR6090-201ENST00000622481 60 ntBASIC17.4■□□□□ 0.38
TRBV27A0A0K0K1C4 ERN1-208ENST00000606895 2068 ntBASIC17.4■□□□□ 0.38
TRBV27A0A0K0K1C4 WHAMMP3-201ENST00000611636 1609 ntBASIC17.39■□□□□ 0.38
TRBV27A0A0K0K1C4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
TRBV27A0A0K0K1C4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRBV27A0A0K0K1C4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV27A0A0K0K1C4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV27A0A0K0K1C4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV27A0A0K0K1C4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV27A0A0K0K1C4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV27A0A0K0K1C4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV27A0A0K0K1C4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV27A0A0K0K1C4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV27A0A0K0K1C4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV27A0A0K0K1C4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV27A0A0K0K1C4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV27A0A0K0K1C4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV27A0A0K0K1C4 AC010501.1-201ENST00000606270 1962 ntBASIC17.37■□□□□ 0.37
TRBV27A0A0K0K1C4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV27A0A0K0K1C4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV27A0A0K0K1C4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRBV27A0A0K0K1C4 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.35■□□□□ 0.37
TRBV27A0A0K0K1C4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRBV27A0A0K0K1C4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRBV27A0A0K0K1C4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV27A0A0K0K1C4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRBV27A0A0K0K1C4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV27A0A0K0K1C4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV27A0A0K0K1C4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV27A0A0K0K1C4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV27A0A0K0K1C4 AC142381.3-201ENST00000568208 1670 ntBASIC17.34■□□□□ 0.37
TRBV27A0A0K0K1C4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV27A0A0K0K1C4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV27A0A0K0K1C4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV27A0A0K0K1C4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TRBV27A0A0K0K1C4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRBV27A0A0K0K1C4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV27A0A0K0K1C4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV27A0A0K0K1C4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV27A0A0K0K1C4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV27A0A0K0K1C4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV27A0A0K0K1C4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV27A0A0K0K1C4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV27A0A0K0K1C4 AC110285.7-201ENST00000624417 1536 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms