Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 AC113347.1-201ENST00000413321 391 ntBASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 AC005363.2-201ENST00000618631 242 ntBASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 AC141257.4-201ENST00000634557 245 ntBASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 AC136944.6-201ENST00000634818 245 ntBASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ABALON-201ENST00000629058 1903 ntBASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.66□□□□□ -0.22
HLA-DRB4X5D2U9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 LINC01023-201ENST00000606054 436 ntBASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AC010240.3-201ENST00000607688 395 ntBASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AL138966.2-201ENST00000621997 464 ntBASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AC092865.7-201ENST00000641832 219 ntBASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 AC009053.2-201ENST00000563701 2365 ntBASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HLA-DRB4X5D2U9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms