Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 TNRC18P2-201ENST00000417666 2714 ntBASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 AC133637.1-201ENST00000624115 1537 ntBASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC01558Q9Y6Z2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 AL359183.1-201ENST00000623796 2132 ntBASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
LINC01558Q9Y6Z2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms