Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
AP4B1Q9Y6B7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 REXO1L10P-201ENST00000615707 1290 ntBASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 MIR6786-201ENST00000616843 113 ntBASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 REXO1L12P-201ENST00000622156 912 ntBASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP4B1Q9Y6B7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4B1Q9Y6B7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 AC011270.2-201ENST00000624293 2550 ntBASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms