Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGC4Q9Y5F7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 AC138932.1-201ENST00000534164 6830 ntBASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 UPK3BP1-201ENST00000428678 509 ntBASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 AL121672.3-201ENST00000608644 468 ntBASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGC4Q9Y5F7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGC4Q9Y5F7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 AL354751.1-201ENST00000412768 1863 ntBASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGC4Q9Y5F7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC4Q9Y5F7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGC4Q9Y5F7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC4Q9Y5F7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC4Q9Y5F7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGC4Q9Y5F7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGC4Q9Y5F7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGC4Q9Y5F7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGC4Q9Y5F7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms