Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 MTMR9LP-203ENST00000426597 1545 ntBASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 AC004263.2-201ENST00000617183 678 ntBASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX2IPQ9Y2D8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 AL032819.2-201ENST00000624543 2162 ntBASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 NUS1P2-201ENST00000417358 873 ntBASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 REXO1L6P-202ENST00000619970 1078 ntBASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SSX2IPQ9Y2D8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms