Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 DRAXINP1-201ENST00000437611 948 ntBASIC20.83■□□□□ 0.93
DDX41Q9UJV9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 TPSP2-201ENST00000561760 610 ntBASIC20.83■□□□□ 0.93
DDX41Q9UJV9 PRELID1P1-202ENST00000567272 903 ntBASIC20.83■□□□□ 0.93
DDX41Q9UJV9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 AL390719.2-201ENST00000606993 987 ntBASIC20.83■□□□□ 0.93
DDX41Q9UJV9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DDX41Q9UJV9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX41Q9UJV9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX41Q9UJV9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DDX41Q9UJV9 AL161938.1-201ENST00000569833 2180 ntBASIC20.83■□□□□ 0.92
DDX41Q9UJV9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX41Q9UJV9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX41Q9UJV9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
DDX41Q9UJV9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.83■□□□□ 0.92
DDX41Q9UJV9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 TPM4P1-201ENST00000436100 807 ntBASIC20.82■□□□□ 0.92
DDX41Q9UJV9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 KRT18P41-201ENST00000518924 1277 ntBASIC20.82■□□□□ 0.92
DDX41Q9UJV9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX41Q9UJV9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 AL691432.3-201ENST00000621860 400 ntBASIC20.81■□□□□ 0.92
DDX41Q9UJV9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX41Q9UJV9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX41Q9UJV9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX41Q9UJV9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX41Q9UJV9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX41Q9UJV9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX41Q9UJV9 AC026396.1-201ENST00000419388 421 ntBASIC20.8■□□□□ 0.92
DDX41Q9UJV9 NUS1P1-201ENST00000446295 882 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms