Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 AC116407.3-201ENST00000623905 1129 ntBASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3BQ9UBC3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 ABCD1P5-201ENST00000445663 754 ntBASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 POLD2P1-201ENST00000511220 997 ntBASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 AC021087.4-201ENST00000563761 564 ntBASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 AC139530.3-201ENST00000620344 690 ntBASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 AC098818.2-201ENST00000564925 2320 ntBASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNMT3BQ9UBC3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 SART3-203ENST00000546611 1184 ntBASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.84■□□□□ 0.61
DNMT3BQ9UBC3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
DNMT3BQ9UBC3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNMT3BQ9UBC3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNMT3BQ9UBC3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNMT3BQ9UBC3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.83■□□□□ 0.61
DNMT3BQ9UBC3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNMT3BQ9UBC3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.61
DNMT3BQ9UBC3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 KRT18P13-201ENST00000400056 1290 ntBASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 AC112698.1-201ENST00000510299 916 ntBASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 AP000974.1-201ENST00000623909 2387 ntBASIC18.83■□□□□ 0.6
DNMT3BQ9UBC3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms