Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LINC00474Q9P2X8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 MYLKP1-201ENST00000509077 1580 ntBASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 AC009947.2-201ENST00000444014 672 ntBASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 AC104390.1-201ENST00000555663 520 ntBASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 MIR4674-201ENST00000582457 87 ntBASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00474Q9P2X8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
LINC00474Q9P2X8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC11.83□□□□□ -0.51
LINC00474Q9P2X8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
LINC00474Q9P2X8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
LINC00474Q9P2X8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 AC093503.3-201ENST00000624917 2352 ntBASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms