Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 RPS14P4-201ENST00000415880 418 ntBASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
FOXD4L1Q9NU39 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 ESRRAP1-201ENST00000400596 1257 ntBASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 CKBP1-201ENST00000565489 1086 ntBASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 PHGDH-209ENST00000641074 1780 ntBASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FOXD4L1Q9NU39 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 AC011506.1-201ENST00000474329 610 ntBASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXD4L1Q9NU39 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 RN7SL471P-201ENST00000580476 299 ntBASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXD4L1Q9NU39 AC005972.3-201ENST00000606304 481 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms