Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 TSPY22P-201ENST00000427496 604 ntBASIC18.7■□□□□ 0.58
VPS45Q9NRW7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 DRAXINP1-201ENST00000437611 948 ntBASIC18.7■□□□□ 0.58
VPS45Q9NRW7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 AC020916.1-201ENST00000587762 1774 ntBASIC18.7■□□□□ 0.58
VPS45Q9NRW7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS45Q9NRW7 BICD1-207ENST00000551848 1962 ntBASIC18.7■□□□□ 0.58
VPS45Q9NRW7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 MIR149-201ENST00000384879 89 ntBASIC18.69■□□□□ 0.58
VPS45Q9NRW7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 LINC00265-3P-201ENST00000447588 903 ntBASIC18.69■□□□□ 0.58
VPS45Q9NRW7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 KRT18P31-201ENST00000506277 1292 ntBASIC18.69■□□□□ 0.58
VPS45Q9NRW7 AC079776.4-201ENST00000511039 504 ntBASIC18.69■□□□□ 0.58
VPS45Q9NRW7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 AC012615.1-201ENST00000565797 1299 ntBASIC18.69■□□□□ 0.58
VPS45Q9NRW7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 AC135050.7-201ENST00000624508 2218 ntBASIC18.69■□□□□ 0.58
VPS45Q9NRW7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS45Q9NRW7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 AP002469.2-201ENST00000531724 424 ntBASIC18.68■□□□□ 0.58
VPS45Q9NRW7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 TPSP2-201ENST00000561760 610 ntBASIC18.68■□□□□ 0.58
VPS45Q9NRW7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 AC009102.3-201ENST00000623118 1491 ntBASIC18.68■□□□□ 0.58
VPS45Q9NRW7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS45Q9NRW7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms