Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.86■□□□□ 0.13
CDH20Q9HBT6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 AC079602.3-201ENST00000623931 403 ntBASIC15.86■□□□□ 0.13
CDH20Q9HBT6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH20Q9HBT6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 HBZP1-201ENST00000354915 429 ntBASIC15.85■□□□□ 0.13
CDH20Q9HBT6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 AC024563.2-201ENST00000603282 481 ntBASIC15.85■□□□□ 0.13
CDH20Q9HBT6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH20Q9HBT6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 LTB4R2-202ENST00000528054 3092 ntBASIC15.84■□□□□ 0.13
CDH20Q9HBT6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 KRT18P48-201ENST00000434763 852 ntBASIC15.84■□□□□ 0.13
CDH20Q9HBT6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH20Q9HBT6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms