Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNCQ9H7C4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNCQ9H7C4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.33■□□□□ 0.69
SYNCQ9H7C4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNCQ9H7C4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SYNCQ9H7C4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNCQ9H7C4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNCQ9H7C4 AL354751.1-201ENST00000412768 1863 ntBASIC19.33■□□□□ 0.69
SYNCQ9H7C4 AC093677.2-201ENST00000600169 1863 ntBASIC19.33■□□□□ 0.69
SYNCQ9H7C4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.33■□□□□ 0.69
SYNCQ9H7C4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.33■□□□□ 0.69
SYNCQ9H7C4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNCQ9H7C4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 AC117947.1-201ENST00000427448 529 ntBASIC19.33■□□□□ 0.68
SYNCQ9H7C4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNCQ9H7C4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 AK4P3-201ENST00000418260 669 ntBASIC19.32■□□□□ 0.68
SYNCQ9H7C4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 RASA4DP-201ENST00000460726 1199 ntBASIC19.32■□□□□ 0.68
SYNCQ9H7C4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.32■□□□□ 0.68
SYNCQ9H7C4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNCQ9H7C4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 RNF152P1-201ENST00000397754 604 ntBASIC19.31■□□□□ 0.68
SYNCQ9H7C4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.31■□□□□ 0.68
SYNCQ9H7C4 AC092647.4-201ENST00000457211 535 ntBASIC19.31■□□□□ 0.68
SYNCQ9H7C4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNCQ9H7C4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SYNCQ9H7C4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms