Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 DGCR9-201ENST00000609630 2415 ntBASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 AL138688.1-201ENST00000624851 1594 ntBASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 RPS2P7-201ENST00000447334 885 ntBASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 GAK-223ENST00000628912 497 ntTSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 AL355312.1-201ENST00000407115 2176 ntBASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 AF131216.4-201ENST00000638924 1588 ntBASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CYSTM1Q9H1C7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CYSTM1Q9H1C7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 AL096828.2-201ENST00000567259 1965 ntBASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 HLA-DQB2-231ENST00000435145 2026 ntBASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 AC004817.3-201ENST00000602957 2129 ntBASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms