Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.47■■□□□ 1.03
NBPF3Q9H094 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 ABALON-201ENST00000629058 1903 ntBASIC21.47■■□□□ 1.03
NBPF3Q9H094 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 RN7SL606P-201ENST00000472779 293 ntBASIC21.46■■□□□ 1.03
NBPF3Q9H094 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 IFNL4P1-201ENST00000607083 540 ntBASIC21.46■■□□□ 1.03
NBPF3Q9H094 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NBPF3Q9H094 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF3Q9H094 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
NBPF3Q9H094 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
NBPF3Q9H094 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF3Q9H094 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
NBPF3Q9H094 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 EMBP1-201ENST00000458200 901 ntBASIC21.44■■□□□ 1.02
NBPF3Q9H094 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.44■■□□□ 1.02
NBPF3Q9H094 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF3Q9H094 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms