Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPF3BQ9BZI7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 SLC25A6P5-201ENST00000435663 894 ntBASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 AL049597.2-201ENST00000565575 961 ntBASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.63■■□□□ 1.05
UPF3BQ9BZI7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 MIR3180-4-201ENST00000582223 153 ntBASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF3BQ9BZI7 LINC01568-207ENST00000641790 1380 ntBASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 HMGA1P5-201ENST00000412453 271 ntBASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF3BQ9BZI7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 AC132938.6-201ENST00000623828 1655 ntBASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.6■■□□□ 1.05
UPF3BQ9BZI7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms