Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AL671277.2-201ENST00000458060 996 ntBASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 NEK4P2-201ENST00000580004 1012 ntBASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 LINC01126-201ENST00000623515 1646 ntBASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF4Q9BUZ4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 HTR7P1-202ENST00000624664 4411 ntBASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 TEX21P-204ENST00000641479 1693 ntBASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 AC009947.2-201ENST00000444014 672 ntBASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF4Q9BUZ4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 PCED1CP-201ENST00000419887 785 ntBASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 TSPY21P-201ENST00000433481 731 ntBASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 FAM86EP-206ENST00000510506 987 ntBASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAF4Q9BUZ4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAF4Q9BUZ4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAF4Q9BUZ4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAF4Q9BUZ4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAF4Q9BUZ4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAF4Q9BUZ4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAF4Q9BUZ4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAF4Q9BUZ4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms