Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 AC133681.1-201ENST00000465482 601 ntBASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 AC110285.5-201ENST00000611501 352 ntBASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 AL121906.2-201ENST00000621597 723 ntBASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFAF3Q9BU61 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 KRASP1-201ENST00000407852 552 ntBASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 MIR4497-201ENST00000583208 89 ntBASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 AC124016.1-201ENST00000609552 612 ntBASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFAF3Q9BU61 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFAF3Q9BU61 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms