Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 MIR1238-201ENST00000408483 83 ntBASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 MIR4497-201ENST00000583208 89 ntBASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CHRDL1Q9BU40 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 KRT8P45-201ENST00000414328 1447 ntBASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 AC112777.1-201ENST00000540175 1423 ntBASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 TSPY15P-201ENST00000457163 923 ntBASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 FITM1-202ENST00000559294 800 ntBASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 MIR4674-201ENST00000582457 87 ntBASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 MYC-208ENST00000641036 567 ntBASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 AC008764.6-201ENST00000595909 2069 ntBASIC14.42□□□□□ -0.1
CHRDL1Q9BU40 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 MIR564-202ENST00000385049 94 ntBASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 AL023803.3-201ENST00000615559 522 ntBASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 AC066615.1-201ENST00000640911 628 ntBASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CHRDL1Q9BU40 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms